Detail information of GWHGAAEX018460/evm.TU.scaffold_94.95


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383767467|ref|YP_005446449.1|3.00E-31hypothetical protein PSMK_23930 [Phycisphaera mikurensis NBRC 102666]
nrgi|743803700|ref|XP_010926998.1|1.78E-146PREDICTED: uncharacterized protein LOC105049133 [Elaeis guineensis]
trEMBLtr|I1GRL6|I1GRL6_BRADI1.00E-128Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G19145.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009237235413752102-
Transcript Sequence

Network for GWHGAAEX018460

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0006281Biological ProcessDNA repair
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.580
SRR2545915Juvenile tuber19.930
SRP108465SRR5643513five period of Gastrodia elata20.130
SRR5643514five period of Gastrodia elata22.210
SRR5643515five period of Gastrodia elata22.500
SRR5643524five period of Gastrodia elata23.960
SRR5643525five period of Gastrodia elata19.010
SRR5643528five period of Gastrodia elata25.520
SRR5643658five period of Gastrodia elata21.220
SRR5643659five period of Gastrodia elata20.590
SRR5643660five period of Gastrodia elata20.810
SRR5643661five period of Gastrodia elata17.610
SRR5643662five period of Gastrodia elata18.940
SRR5643663five period of Gastrodia elata20.110
SRR5643664five period of Gastrodia elata19.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.360
SRR6049655Rhizomagastrodiae_C368-T10_good_127.300
SRR6049656Rhizomagastrodiae_C368-T07_good_122.130
SRR6049657Rhizomagastrodiae_C368-T07_good_122.020
SRR6049658Rhizomagastrodiae_C368-T04_good_119.650
SRR6049659Rhizomagastrodiae_C368-T04_good_120.460
SRR6049660Rhizomagastrodiae_C368-T01_good_122.520
SRR6049661Rhizomagastrodiae_C368-T04_good_120.060
SRR6049662Rhizomagastrodiae_C368-T01_good_121.130
SRR6049663Rhizomagastrodiae_C368-T01_good_122.060
SRR6049664Rhizomagastrodiae_C368-T10_good_127.950
SRR6049665Rhizomagastrodiae_C368-T10_good_127.950
SRP279888GastroGastrodia elata tuber 15.89
JuvenJuvenile tuber20.20
Mother_GastroMother tuber of Gastrodia elata 17.45
Mother_JuvenMother tuber of Juvenile 13.67