Detail information of GWHGAAEX018471/evm.TU.scaffold_95.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672141525|ref|XP_008794593.1|3.39E-65PREDICTED: RPM1-interacting protein 4 isoform X2 [Phoenix dactylifera]
Swissprottr|Q8GYN5|RIN4_ARATH2.00E-23RPM1-interacting protein 4
trEMBLtr|A0A061DV43|A0A061DV43_THECC1.00E-49RPM1 interacting protein 4, putative {ECO:0000313|EMBL:EOX93878.1}
TAIRAT3G250702.00E-20RPM1 interacting protein 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000101103305132602-
Transcript Sequence

Network for GWHGAAEX018471

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05627.10AvrRpt-cleavage1912261.10E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13456RIN4 Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms43.520
SRR2545915Juvenile tuber40.340
SRP108465SRR5643513five period of Gastrodia elata28.790
SRR5643514five period of Gastrodia elata30.800
SRR5643515five period of Gastrodia elata31.590
SRR5643524five period of Gastrodia elata30.740
SRR5643525five period of Gastrodia elata48.280
SRR5643528five period of Gastrodia elata57.630
SRR5643658five period of Gastrodia elata50.610
SRR5643659five period of Gastrodia elata23.110
SRR5643660five period of Gastrodia elata22.940
SRR5643661five period of Gastrodia elata25.690
SRR5643662five period of Gastrodia elata29.040
SRR5643663five period of Gastrodia elata33.000
SRR5643664five period of Gastrodia elata29.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.790
SRR6049655Rhizomagastrodiae_C368-T10_good_148.560
SRR6049656Rhizomagastrodiae_C368-T07_good_127.370
SRR6049657Rhizomagastrodiae_C368-T07_good_127.120
SRR6049658Rhizomagastrodiae_C368-T04_good_129.350
SRR6049659Rhizomagastrodiae_C368-T04_good_136.860
SRR6049660Rhizomagastrodiae_C368-T01_good_126.140
SRR6049661Rhizomagastrodiae_C368-T04_good_126.010
SRR6049662Rhizomagastrodiae_C368-T01_good_123.530
SRR6049663Rhizomagastrodiae_C368-T01_good_127.890
SRR6049664Rhizomagastrodiae_C368-T10_good_131.510
SRR6049665Rhizomagastrodiae_C368-T10_good_131.510
SRP279888GastroGastrodia elata tuber 28.06
JuvenJuvenile tuber40.40
Mother_GastroMother tuber of Gastrodia elata 59.62
Mother_JuvenMother tuber of Juvenile 59.97