Detail information of GWHGAAEX018476/evm.TU.scaffold_95.11
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2407 | 0 | GPI transamidase complex, GPI16/PIG-T component, involved in glycosylphosphatidylinositol anchor biosynthesis |
| nr | gi|743813712|ref|XP_010929799.1| | 0 | PREDICTED: GPI transamidase component PIG-T isoform X1 [Elaeis guineensis] |
| trEMBL | tr|M0T4Q7|M0T4Q7_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P06590_001} |
| TAIR | AT3G07140 | 0 | GPI transamidase component Gpi16 subunit family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000101 | 302775 | 346804 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018476
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04113.13 | Gpi16 | 33 | 589 | 3.80E-161 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05292 | PIGT | Metabolic pathways | map01100 |
| Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | map00563 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016255 | Biological Process | attachment of GPI anchor to protein |
| GO:0042765 | Cellular Component | GPI-anchor transamidase complex |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.950 |
| SRR2545915 | Juvenile tuber | 10.510 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.290 |
| SRR5643514 | five period of Gastrodia elata | 10.500 | |
| SRR5643515 | five period of Gastrodia elata | 10.750 | |
| SRR5643524 | five period of Gastrodia elata | 12.100 | |
| SRR5643525 | five period of Gastrodia elata | 6.660 | |
| SRR5643528 | five period of Gastrodia elata | 9.310 | |
| SRR5643658 | five period of Gastrodia elata | 10.630 | |
| SRR5643659 | five period of Gastrodia elata | 8.510 | |
| SRR5643660 | five period of Gastrodia elata | 8.530 | |
| SRR5643661 | five period of Gastrodia elata | 8.130 | |
| SRR5643662 | five period of Gastrodia elata | 5.200 | |
| SRR5643663 | five period of Gastrodia elata | 7.340 | |
| SRR5643664 | five period of Gastrodia elata | 4.720 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 7.900 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 9.130 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.640 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 7.450 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 7.030 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.250 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 7.390 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.880 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 12.400 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 9.810 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 13.480 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 13.480 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.88 |
| Juven | Juvenile tuber | 7.74 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.50 | |
| Mother_Juven | Mother tuber of Juvenile | 11.50 |