Detail information of GWHGAAEX018478/evm.TU.scaffold_95.13
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|338211586|ref|YP_004655639.1| | 1.00E-21 | metallophosphoesterase [Runella slithyformis DSM 19594] |
| KOG | KOG1378 | 0 | Purple acid phosphatase |
| nr | gi|695076409|ref|XP_009385494.1| | 0 | PREDICTED: purple acid phosphatase 15 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9SFU3|PPA15_ARATH | 0 | Purple acid phosphatase 15 (Precursor) |
| trEMBL | tr|M0U5B2|M0U5B2_MUSAM | 0 | Purple acid phosphatase {ECO:0000256|RuleBase:RU361203} |
| TAIR | AT3G07130 | 0 | purple acid phosphatase 15 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000101 | 472690 | 511348 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018478
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF16656.4 | Pur_ac_phosph_N | 71 | 183 | 6.20E-19 |
| PF00149.27 | Metallophos | 195 | 407 | 1.60E-26 |
| PF14008.5 | Metallophos_C | 472 | 513 | 3.80E-10 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016787 | Molecular Function | hydrolase activity |
| GO:0003993 | Molecular Function | acid phosphatase activity |
| GO:0046872 | Molecular Function | metal ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 58.650 |
| SRR2545915 | Juvenile tuber | 34.080 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 28.430 |
| SRR5643514 | five period of Gastrodia elata | 33.140 | |
| SRR5643515 | five period of Gastrodia elata | 32.730 | |
| SRR5643524 | five period of Gastrodia elata | 29.700 | |
| SRR5643525 | five period of Gastrodia elata | 156.560 | |
| SRR5643528 | five period of Gastrodia elata | 81.860 | |
| SRR5643658 | five period of Gastrodia elata | 150.760 | |
| SRR5643659 | five period of Gastrodia elata | 21.550 | |
| SRR5643660 | five period of Gastrodia elata | 23.750 | |
| SRR5643661 | five period of Gastrodia elata | 21.000 | |
| SRR5643662 | five period of Gastrodia elata | 54.740 | |
| SRR5643663 | five period of Gastrodia elata | 41.010 | |
| SRR5643664 | five period of Gastrodia elata | 33.960 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 50.480 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 46.500 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 53.230 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 51.020 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 68.010 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 83.810 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 74.380 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 66.650 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 40.410 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 43.680 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 46.040 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 46.040 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 29.51 |
| Juven | Juvenile tuber | 36.79 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 58.86 | |
| Mother_Juven | Mother tuber of Juvenile | 35.36 |