Detail information of GWHGAAEX018480/evm.TU.scaffold_95.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17724.00E-29Vacuolar H+-ATPase V1 sector, subunit G
nrgi|695024170|ref|XP_009399285.1|6.30E-42PREDICTED: V-type proton ATPase subunit G1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SP55|VATG_CITLI3.00E-35V-type proton ATPase subunit G
trEMBLtr|M0SV17|M0SV17_MUSAM2.00E-42Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P02380_001}
TAIRAT4G259504.00E-29vacuolar ATP synthase G3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000101518491527395+
Transcript Sequence

Network for GWHGAAEX018480

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03179.14V-ATPase_G61087.90E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02152ATPeV1G, ATP6G Metabolic pathways map01100
Oxidative phosphorylationmap00190
mTOR signaling pathwaymap04150
Phagosomemap04145
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:1902600Biological Processhydrogen ion transmembrane transport
GO:0042626Molecular FunctionATPase activity, coupled to transmembrane movement of substances
GO:0016471Cellular Componentvacuolar proton-transporting V-type ATPase complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms52.140
SRR2545915Juvenile tuber49.330
SRP108465SRR5643513five period of Gastrodia elata90.910
SRR5643514five period of Gastrodia elata67.010
SRR5643515five period of Gastrodia elata58.220
SRR5643524five period of Gastrodia elata51.360
SRR5643525five period of Gastrodia elata142.770
SRR5643528five period of Gastrodia elata80.070
SRR5643658five period of Gastrodia elata104.780
SRR5643659five period of Gastrodia elata95.680
SRR5643660five period of Gastrodia elata105.660
SRR5643661five period of Gastrodia elata82.380
SRR5643662five period of Gastrodia elata80.730
SRR5643663five period of Gastrodia elata95.680
SRR5643664five period of Gastrodia elata88.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1307.290
SRR6049655Rhizomagastrodiae_C368-T10_good_1128.860
SRR6049656Rhizomagastrodiae_C368-T07_good_1412.720
SRR6049657Rhizomagastrodiae_C368-T07_good_1280.830
SRR6049658Rhizomagastrodiae_C368-T04_good_1394.970
SRR6049659Rhizomagastrodiae_C368-T04_good_1371.730
SRR6049660Rhizomagastrodiae_C368-T01_good_1369.720
SRR6049661Rhizomagastrodiae_C368-T04_good_1483.900
SRR6049662Rhizomagastrodiae_C368-T01_good_1540.450
SRR6049663Rhizomagastrodiae_C368-T01_good_1505.470
SRR6049664Rhizomagastrodiae_C368-T10_good_1338.700
SRR6049665Rhizomagastrodiae_C368-T10_good_1338.700
SRP279888GastroGastrodia elata tuber 191.42
JuvenJuvenile tuber105.27
Mother_GastroMother tuber of Gastrodia elata 338.74
Mother_JuvenMother tuber of Juvenile 105.50