Detail information of GWHGAAEX018493/evm.TU.scaffold_95.28
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0627 | 2.00E-109 | Heat shock transcription factor |
| nr | gi|401761495|gb|AFQ02689.1| | 1.22E-156 | heat stress transcription factor A-5-like protein, partial [Oncidium hybrid cultivar] |
| Swissprot | tr|Q6K6S5|HSFA5_ORYSJ | 4.00E-131 | Heat stress transcription factor A-5 |
| trEMBL | tr|M4H7W1|M4H7W1_ONCHC | 5.00E-157 | Heat stress transcription factor A-5-like protein {ECO:0000313|EMBL:AFQ02689.1} (Fragment) |
| TAIR | AT4G13980_2 | 2.00E-109 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000101 | 843939 | 845869 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018493
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00447.16 | HSF_DNA-bind | 23 | 112 | 1.70E-29 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HSF |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0005634 | Cellular Component | nucleus |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 17.260 |
| SRR2545915 | Juvenile tuber | 14.680 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 23.190 |
| SRR5643514 | five period of Gastrodia elata | 13.040 | |
| SRR5643515 | five period of Gastrodia elata | 19.660 | |
| SRR5643524 | five period of Gastrodia elata | 13.510 | |
| SRR5643525 | five period of Gastrodia elata | 11.470 | |
| SRR5643528 | five period of Gastrodia elata | 11.260 | |
| SRR5643658 | five period of Gastrodia elata | 8.250 | |
| SRR5643659 | five period of Gastrodia elata | 14.520 | |
| SRR5643660 | five period of Gastrodia elata | 13.310 | |
| SRR5643661 | five period of Gastrodia elata | 14.300 | |
| SRR5643662 | five period of Gastrodia elata | 14.620 | |
| SRR5643663 | five period of Gastrodia elata | 15.430 | |
| SRR5643664 | five period of Gastrodia elata | 12.990 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 13.610 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 21.450 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 13.550 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 19.240 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 13.960 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 16.390 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 12.280 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 13.380 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.910 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 9.350 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 15.400 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 15.400 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 10.89 |
| Juven | Juvenile tuber | 17.06 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 39.81 | |
| Mother_Juven | Mother tuber of Juvenile | 24.69 |