Detail information of GWHGAAEX018519/evm.TU.scaffold_95.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG03811.00E-21HMG box-containing protein
nrgi|695019037|ref|XP_009396502.1|9.65E-43PREDICTED: high mobility group B protein 14-like [Musa acuminata subsp. malaccensis]
Swissprottr|O64702|HMG14_ARATH3.00E-37High mobility group B protein 14
trEMBLtr|M0SP15|M0SP15_MUSAM8.00E-43Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P15000_001}
TAIRAT3G518801.00E-21high mobility group B1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010117679661792295-
Transcript Sequence

Network for GWHGAAEX018519

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00505.18HMG_box451133.80E-17
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyHMG

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.690
SRR2545915Juvenile tuber8.920
SRP108465SRR5643513five period of Gastrodia elata10.740
SRR5643514five period of Gastrodia elata8.990
SRR5643515five period of Gastrodia elata10.960
SRR5643524five period of Gastrodia elata11.860
SRR5643525five period of Gastrodia elata5.060
SRR5643528five period of Gastrodia elata7.870
SRR5643658five period of Gastrodia elata4.680
SRR5643659five period of Gastrodia elata16.210
SRR5643660five period of Gastrodia elata12.880
SRR5643661five period of Gastrodia elata12.250
SRR5643662five period of Gastrodia elata10.710
SRR5643663five period of Gastrodia elata11.360
SRR5643664five period of Gastrodia elata6.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.560
SRR6049655Rhizomagastrodiae_C368-T10_good_111.620
SRR6049656Rhizomagastrodiae_C368-T07_good_18.680
SRR6049657Rhizomagastrodiae_C368-T07_good_17.450
SRR6049658Rhizomagastrodiae_C368-T04_good_16.980
SRR6049659Rhizomagastrodiae_C368-T04_good_13.160
SRR6049660Rhizomagastrodiae_C368-T01_good_15.530
SRR6049661Rhizomagastrodiae_C368-T04_good_17.950
SRR6049662Rhizomagastrodiae_C368-T01_good_18.690
SRR6049663Rhizomagastrodiae_C368-T01_good_16.310
SRR6049664Rhizomagastrodiae_C368-T10_good_113.370
SRR6049665Rhizomagastrodiae_C368-T10_good_113.370
SRP279888GastroGastrodia elata tuber 10.11
JuvenJuvenile tuber15.49
Mother_GastroMother tuber of Gastrodia elata 4.82
Mother_JuvenMother tuber of Juvenile 7.27