Detail information of GWHGAAEX018530/evm.TU.scaffold_95.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|2.00E-30hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG11870Serine/threonine protein kinase
nrgi|743757111|ref|XP_010920329.1|0PREDICTED: serine/threonine-protein kinase CDL1-like [Elaeis guineensis]
Swissprottr|Q0WRY5|CDL1_ARATH3.00E-96Serine/threonine-protein kinase CDL1 {ECO:0000305}
trEMBLtr|A0A061DJT4|A0A061DJT4_THECC0Kinase superfamily protein {ECO:0000313|EMBL:EOX92880.1}
TAIRAT3G586900Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010121678372174594-
Transcript Sequence

Network for GWHGAAEX018530

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase933021.10E-42
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_Extensin

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.080
SRR2545915Juvenile tuber5.710
SRP108465SRR5643513five period of Gastrodia elata7.960
SRR5643514five period of Gastrodia elata7.580
SRR5643515five period of Gastrodia elata5.240
SRR5643524five period of Gastrodia elata7.190
SRR5643525five period of Gastrodia elata1.670
SRR5643528five period of Gastrodia elata0.380
SRR5643658five period of Gastrodia elata1.350
SRR5643659five period of Gastrodia elata2.340
SRR5643660five period of Gastrodia elata2.210
SRR5643661five period of Gastrodia elata2.250
SRR5643662five period of Gastrodia elata1.210
SRR5643663five period of Gastrodia elata0.800
SRR5643664five period of Gastrodia elata1.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.570
SRR6049655Rhizomagastrodiae_C368-T10_good_18.340
SRR6049656Rhizomagastrodiae_C368-T07_good_113.010
SRR6049657Rhizomagastrodiae_C368-T07_good_119.380
SRR6049658Rhizomagastrodiae_C368-T04_good_120.890
SRR6049659Rhizomagastrodiae_C368-T04_good_119.580
SRR6049660Rhizomagastrodiae_C368-T01_good_122.430
SRR6049661Rhizomagastrodiae_C368-T04_good_125.040
SRR6049662Rhizomagastrodiae_C368-T01_good_114.440
SRR6049663Rhizomagastrodiae_C368-T01_good_112.690
SRR6049664Rhizomagastrodiae_C368-T10_good_110.140
SRR6049665Rhizomagastrodiae_C368-T10_good_110.140
SRP279888GastroGastrodia elata tuber 4.66
JuvenJuvenile tuber6.74
Mother_GastroMother tuber of Gastrodia elata 0.91
Mother_JuvenMother tuber of Juvenile 2.38