Detail information of GWHGAAEX018531/evm.TU.scaffold_95.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29594.00E-60Transcriptional regulator
nrgi|743757101|ref|XP_010920286.1|1.19E-136PREDICTED: uncharacterized protein LOC105044164 isoform X2 [Elaeis guineensis]
trEMBLtr|M0SEV9|M0SEV9_MUSAM4.00E-112Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P15430_001}
TAIRAT1G292204.00E-60transcriptional regulator family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010121997662242145-
Transcript Sequence

Network for GWHGAAEX018531

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07818.12HCNGP2513442.00E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.490
SRR2545915Juvenile tuber21.190
SRP108465SRR5643513five period of Gastrodia elata23.790
SRR5643514five period of Gastrodia elata22.520
SRR5643515five period of Gastrodia elata19.960
SRR5643524five period of Gastrodia elata20.360
SRR5643525five period of Gastrodia elata21.740
SRR5643528five period of Gastrodia elata18.610
SRR5643658five period of Gastrodia elata23.250
SRR5643659five period of Gastrodia elata21.660
SRR5643660five period of Gastrodia elata18.810
SRR5643661five period of Gastrodia elata18.730
SRR5643662five period of Gastrodia elata16.790
SRR5643663five period of Gastrodia elata17.020
SRR5643664five period of Gastrodia elata18.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.870
SRR6049655Rhizomagastrodiae_C368-T10_good_133.990
SRR6049656Rhizomagastrodiae_C368-T07_good_119.820
SRR6049657Rhizomagastrodiae_C368-T07_good_131.900
SRR6049658Rhizomagastrodiae_C368-T04_good_129.120
SRR6049659Rhizomagastrodiae_C368-T04_good_132.340
SRR6049660Rhizomagastrodiae_C368-T01_good_126.280
SRR6049661Rhizomagastrodiae_C368-T04_good_126.250
SRR6049662Rhizomagastrodiae_C368-T01_good_121.520
SRR6049663Rhizomagastrodiae_C368-T01_good_122.520
SRR6049664Rhizomagastrodiae_C368-T10_good_123.390
SRR6049665Rhizomagastrodiae_C368-T10_good_123.390
SRP279888GastroGastrodia elata tuber 19.03
JuvenJuvenile tuber39.87
Mother_GastroMother tuber of Gastrodia elata 28.15
Mother_JuvenMother tuber of Juvenile 30.51