Gene detail

Detail information of GWHGAAEX018534/evm.TU.scaffold_95.81

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|336116124\|ref\|YP_004570890.1\|	5.00E-50	cytochrome P450 [Microlunatus phosphovorus NM-1]
KOG	KOG0157	6.00E-179	Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
nr	gi\|674934856\|emb\|CDX98481.1\|	0	BnaC05g38940D [Brassica napus]
Swissprot	tr\|H2DH21\|C7A29_PANGI	0	Cytochrome P450 CYP72A219
trEMBL	tr\|A0A078EBB9\|A0A078EBB9_BRANA	0	BnaC05g38940D protein {ECO:0000313\|EMBL:CDX98481.1}
trEMBL	tr\|A0A078EBB9\|A0A078EBB9_BRANA	0	BnaC05g38940D protein {ECO:0000313\|EMBL:CDX98481.1}
trEMBL	tr\|A0A078EBB9\|A0A078EBB9_BRANA	3.00E-145	BnaC05g38940D protein {ECO:0000313\|EMBL:CDX98481.1}
TAIR	AT3G14690	6.00E-179	cytochrome P450, family 72, subfamily A, polypeptide 15

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000101	2295221	2317828	+

Transcript Sequence
>GWHTAAEX018534 ATGGAGGCTAGTGGTGGGGCAGGTGGAGGGAAGTGGGCGCTTAAGAGAGGATTGGGGGGGTATATAGGGGAGGAAAGGGGAGGGGCTCATCCCGGCCCAACAGGTCGGCCGATGGCCGAGGAGGCTGCCGCTTGCTGGTGCAGGCCGTCGCAGTGCCGTGCGCTGCACGACATGCGGGCTTGTCTGCCACACGCAAGTAGAAATTTATTTGATATGACTGCTACAACAATGAGTCACATGGAGGCGTTGTTGTACTGGTTAGCGTTGGCGGCGGCCGTTTGGGTGGGATGGTCGGTGGCGGAGTGGCTGTGGTTGCGGCCACGGCGGCTGGAGAGGAAGCTGAGGGAGCAGGGCTTTCGAGGAACCAAGTATCGCTTTCCCAACGGTGATCTAACGGATCATGCGAATCTGTTACTGGAAGCTTGCCGGAATCCCATGCCGTTTTCACACCGCATAGTCGACCGCGTCATCCCCAATTTTAAGAGCGTTGTGGATCTCTATGGAGGCAAAGAAAAGGCTCCTGTTTATTATTGGCTTGGACCTGTTCCCAGGGTGATCATAAGGGATCTCGAGCTTATAAAGGACATTCTATCTAGCAAATTCGTTCATTTTGAGAAGCTGAGCTCTTCCTCAATTGGGAGGCTGCTTCAAGGATTACTAGCATATGATGGTCCAAAATGGGCCAAGCATAGAAGAATCATTAATCCAGCTTTTCATGTTGAAAAGCTAAAGTTAATGATGCCCGCATTTTCTACTTGTTGTGATGAGCTGATAATTCGTTGGGAGGATTTGACTGAAAATACGTCTGAAATAGATATCTGGCAAGAATTGAAGAACTTTGCTGGAAATATCATCTCACGAGCAGCATTTGGTAGCAACTATAGAGAGGGAAGGCGAGTTTTTGAATTGTTGTTAGAGCAAACTGTGCTTGCGGTTCAAGAAACTCGGAGCTTGAATATTCCTGGCTTTAGATTTATTCCCACCCCGAAAAATAAACGAAGTAAGAAAATCCACAAGGAGGTTGTTACACTACTAAAAAGTATGATTGAGCAAAGAGAGTATTTAATGAAAAATAATAAAGTTGGATCTGATGACCTGTTGGGATTACTTATAGAATCAAATCAAAGGCATGTGGAAGAAGGGAATCACCATCAAGATGCTAGTTTGACTAAAGAAGATGTGATTAAGGAGTGCAAATTGTTTTACATAGCAGGGCAAGAGACAATTGCTGTTCTTCTCACATGGGCTATAATTGCTCTAAGCATGCATCAAAATTGGCAAGATCAAGCAAGAAAAGAGGTTATGGATGTGTTTGGACAAAATAAACCAACATTTGAAGGGTTAAGCAGGCTAAAGATTGTGACCATGATACTTTATGAGGTTCTGAGGCTATATCCACCGTTAGTAACCCTCTTTCGACAAATAAACAAGGAAATAAAATTGCGAGAGTTCAATCTTCCAGCAGGAGTTCAACTTGTAATACCCATTATTATTCTCCATCATAGCCAGGAGCTTTGGGGCGAAGATGCTGAAGAATTCAATCCTGGGAGATTTACCGACGGAGTTTCAAATGCAACAAAAAACCAACTCATCTTCTTCCCTTTTGGTTGGGGTCCTCGGATATGCATCGGCCAGAACTTTGCACTAATTGAAGCAAAAATGGCCTTGGCAAGAATTCTACAATGCTTCTCAGTTGAGTTGTCGCCTTCCTATGCCCATGCTCCCTGTGTTGTCCTAACCCTTCAACCTCAACATGGTGCTCAAGTCATATTACATAAACTTCCAGTACTCCAAATGGAGACCTTTTTGTTGTACTGGTTGGCGTTGGCGGCGACGGTAACGATAACGGCGGCCGGTTGGGTGGGCTGGTCGGTGGCGGAGTGGCTGTGGCTGCGGCCGCGTCAGCTGGAGAGGAAGCTGATGGCACAGGGCCTTCGAGGAACCAAGTATCGCTTTCCCAACGGTGATCTAACGGATCATCTGAAACTCATTCGGGAAGCTTGCCGGAACCCCATGCAGCTTTCGCACCGTATCGTCGATCGCGCCATCCCCCATCTTAAGAGCGTTATGGATATCTATGGAGAAAAGGCTCCCGTATATTTTTGGTTTGGACCTATTCCAAAAGTGATAGTTAAAGATCCCGATCTTATAAAGGATATTCTATCGACCAGATTCGGTCACTTTGAGAAGCCGAGCTTGAGTCCATTTGGGAGGTTGCTTGTGCTCGGACTAGTAACCTATGATGGTTCAAAATGGGCCAAACATAGAAGAATCATTAACCCCGCTTTTCATGTTGAAAAGCTTAAGTTGATGATGCCTGCATTTTCAACTTGTTGTGATGAGCTGATAAGTCGTTGGGAGAGTTTGACTGAAAGTAAAAGAGCGTTTGAAATAGATATTTGGCCAGAATTGAAAAATTTTACTGGAGATGTCATATCTCGGGCAGCATTTGGTAGAAGTTATAGAGAGGGAAGACGTATTTTTGAATTACAGATAGAGCAGACTGAGCTTGTTGCTCAAGCTTCTAAGAGTTTGTATATTCCTGGTTTTAGATTTATTCCCACCCCAAAGAACAGACGACGCAAGGAAATATATAAGGAGGTTGTTGTGTTAGTTGAAAGAATGATTGGGCAAAGAGAGCTTGCAATGAAAAATGGTGAAGTCATATTTGATGACCTCTTTGGATTATTGATGGAATCAAATCAAAGGCTTATAGAGGAAGGGGATCACCATCAAGATGTTAACTTGACTAGAGAAGATGTGATTGAGGAGTGCAAGTTGTTTTACTTTGTAGGGCAGGAGACAACTGCTGATCTTCTCACATGGATTATAATTTTATTATGCATGCATCAAGGTTGGCAAGATCAGGCAAGAGAAGAGGTTATGAAGGTATTTGGCCAAAATAAGCCAACTTTTGAGGGTTTAAGCCGATTGAAGATTGTCACCATGATAATATATGAGGTTCTAAGGTTATATCCACCTGCAGCTGTTCTCACTCGACAAATAAATAAGGAAATGAAATTAGGAGAGTTTAGTCTCCCAGCGGGAGTGCAACTTGTTATGCCCACTATCATTCTCCATCATAGTCATGAGTTATGGGGAAAAGATGCTGAAGAATTCAACCCTAAGAGATTTGATAATGGAGTTTCAAACGCAACAAAGAACCAACTTATCTTCTTTCCTTTTGGCTGGGGTCCTCGGATCTGCATTGGCCAAAGCTTCGCGCTGGTAGAAGCAAAAATGGCTTTGGCAAGAATTCTGCAACGCTTTTCATTTGAGTTATCACCCTCCTATGCCCATGCTCCTTGTAACGTCTTAACCCTTCAGACCCAACACGGTGCTCCAATCATATTACACAAGCTTTCAATATTGTAA

Network for GWHGAAEX018534

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	169	570	3.80E-78
PF00067.21	p450	699	1097	5.60E-76

Protein Sequence

>GWHPAAEX018534
MEASGGAGGGKWALKRGLGGYIGEERGGAHPGPTGRPMAEEAAACWCRPSQCRALHDMRACLPHASRNLFDMTATTMSHMEALLYWLALAAAVWVGWSVAEWLWLRPRRLERKLREQGFRGTKYRFPNGDLTDHANLLLEACRNPMPFSHRIVDRVIPNFKSVVDLYGGKEKAPVYYWLGPVPRVIIRDLELIKDILSSKFVHFEKLSSSSIGRLLQGLLAYDGPKWAKHRRIINPAFHVEKLKLMMPAFSTCCDELIIRWEDLTENTSEIDIWQELKNFAGNIISRAAFGSNYREGRRVFELLLEQTVLAVQETRSLNIPGFRFIPTPKNKRSKKIHKEVVTLLKSMIEQREYLMKNNKVGSDDLLGLLIESNQRHVEEGNHHQDASLTKEDVIKECKLFYIAGQETIAVLLTWAIIALSMHQNWQDQARKEVMDVFGQNKPTFEGLSRLKIVTMILYEVLRLYPPLVTLFRQINKEIKLREFNLPAGVQLVIPIIILHHSQELWGEDAEEFNPGRFTDGVSNATKNQLIFFPFGWGPRICIGQNFALIEAKMALARILQCFSVELSPSYAHAPCVVLTLQPQHGAQVILHKLPVLQMETFLLYWLALAATVTITAAGWVGWSVAEWLWLRPRQLERKLMAQGLRGTKYRFPNGDLTDHLKLIREACRNPMQLSHRIVDRAIPHLKSVMDIYGEKAPVYFWFGPIPKVIVKDPDLIKDILSTRFGHFEKPSLSPFGRLLVLGLVTYDGSKWAKHRRIINPAFHVEKLKLMMPAFSTCCDELISRWESLTESKRAFEIDIWPELKNFTGDVISRAAFGRSYREGRRIFELQIEQTELVAQASKSLYIPGFRFIPTPKNRRRKEIYKEVVVLVERMIGQRELAMKNGEVIFDDLFGLLMESNQRLIEEGDHHQDVNLTREDVIEECKLFYFVGQETTADLLTWIIILLCMHQGWQDQAREEVMKVFGQNKPTFEGLSRLKIVTMIIYEVLRLYPPAAVLTRQINKEMKLGEFSLPAGVQLVMPTIILHHSHELWGKDAEEFNPKRFDNGVSNATKNQLIFFPFGWGPRICIGQSFALVEAKMALARILQRFSFELSPSYAHAPCNVLTLQTQHGAPIILHKLSIL

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP72A7

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0020037	Molecular Function	heme binding
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506	Molecular Function	iron ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.140
SRP064423	SRR2545915	Juvenile tuber	13.130
SRP108465	SRR5643513	five period of Gastrodia elata	11.970
	SRR5643514	five period of Gastrodia elata	13.570
	SRR5643515	five period of Gastrodia elata	8.620
	SRR5643524	five period of Gastrodia elata	11.570
	SRR5643525	five period of Gastrodia elata	7.290
	SRR5643528	five period of Gastrodia elata	5.550
	SRR5643658	five period of Gastrodia elata	7.020
	SRR5643659	five period of Gastrodia elata	9.030
	SRR5643660	five period of Gastrodia elata	9.340
	SRR5643661	five period of Gastrodia elata	7.730
	SRR5643662	five period of Gastrodia elata	7.590
	SRR5643663	five period of Gastrodia elata	8.860
	SRR5643664	five period of Gastrodia elata	8.130
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	12.110
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.830
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.060
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	12.880
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.090
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.130
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.650
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.710
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.920
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.140
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.080
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.080
SRP279888	Gastro	Gastrodia elata tuber	8.66
	Juven	Juvenile tuber	15.10
	Mother_Gastro	Mother tuber of Gastrodia elata	9.21
	Mother_Juven	Mother tuber of Juvenile	5.20