Detail information of GWHGAAEX018538/evm.TU.scaffold_95.87
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|410865153|ref|YP_006979764.1| | 3.00E-24 | kinase domain-containing protein [Propionibacterium acidipropionici ATCC 4875] |
| KOG | KOG0660 | 0 | Mitogen-activated protein kinase |
| nr | gi|620598935|gb|AHY20717.1| | 0 | mitogen-activated protein kinase [Dendrobium catenatum] |
| Swissprot | tr|Q5ZCI1|MPK10_ORYSJ | 0 | Mitogen-activated protein kinase 10 |
| trEMBL | tr|A0A023VYC8|A0A023VYC8_9ASPA | 0 | Mitogen-activated protein kinase {ECO:0000313|EMBL:AHY20717.1} |
| TAIR | AT2G42880 | 0 | MAP kinase 20 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000101 | 2440753 | 2446394 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018538
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 25 | 316 | 4.70E-67 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_MAPK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004707 | Molecular Function | MAP kinase activity |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 47.370 |
| SRR2545915 | Juvenile tuber | 69.310 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 107.800 |
| SRR5643514 | five period of Gastrodia elata | 75.820 | |
| SRR5643515 | five period of Gastrodia elata | 163.030 | |
| SRR5643524 | five period of Gastrodia elata | 99.460 | |
| SRR5643525 | five period of Gastrodia elata | 104.190 | |
| SRR5643528 | five period of Gastrodia elata | 139.540 | |
| SRR5643658 | five period of Gastrodia elata | 123.000 | |
| SRR5643659 | five period of Gastrodia elata | 166.690 | |
| SRR5643660 | five period of Gastrodia elata | 138.960 | |
| SRR5643661 | five period of Gastrodia elata | 174.320 | |
| SRR5643662 | five period of Gastrodia elata | 271.510 | |
| SRR5643663 | five period of Gastrodia elata | 256.880 | |
| SRR5643664 | five period of Gastrodia elata | 181.560 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 94.910 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 89.780 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 97.080 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 85.460 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 90.840 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 85.390 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 92.550 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 88.260 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 83.270 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 97.760 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 102.800 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 102.800 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 163.38 |
| Juven | Juvenile tuber | 87.48 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 185.29 | |
| Mother_Juven | Mother tuber of Juvenile | 115.33 |