Gene detail

Detail information of GWHGAAEX018546/evm.TU.scaffold_95.99

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|720025995\|ref\|XP_010264117.1\|	PREDICTED: glycosyltransferase-like At2g41451 [Nelumbo nucifera]
Swissprot	tr\|Q9C9Z9\|ELD1_ARATH	Glycosyltransferase-like KOBITO 1 {ECO:0000303\|PubMed:12215501, ECO:0000303\|PubMed:22457425} (Precursor)
trEMBL	tr\|B9IHV8\|B9IHV8_POPTR	GCN5-related N-acetyltransferase family protein {ECO:0000313\|EMBL:EEF04409.1}
TAIR	AT3G08550	elongation defective 1 protein / ELD1 protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000101	2707449	2756639	-

Transcript Sequence
>GWHTAAEX018546 CGTTAGATTCTCCCCGTAAACTCCCTCGCTTTTTGATTCTTGAGAGTCTCCCTCGCTCTTTGAATCGTGACCGTAACGTCTGTTTTCTTCGTGTTCCCGTAAATCCCCATTACTGTTGGATTCTATACTCCATTTTTTGTTTTTGCCTTGTTTTATCTTTCTCTTTGTACTCGACCCCAATGGCGGGGCTGAACGGCCCCTTGCGCGTTTTGGGTTCGTCTTCCTACGTTCATAGCGGTTTAGTCTGGAGACTGCTCCTCCTCCTGACGATCCTTCCTTTGCTACTCGCCGTCTTTGCTTTCTTCCTCCAATGGCGTGGCGAACTCGACGATCCTACGTCGAGGTGGCCATCGGAGGAACGGAATTTTCTCGGCATGGGTGACAGCCCACTCAGCCTCAGCGATTCATCTCCGTTGGCGACGTCCCTGCTGTCAACAACAGCGGCGGACTGTGGTGAGATCCTTGGTGGAAGCTCCTCACCCTCTTTTCCTTATTACCGCTGGTGGAAGTTCGATTTCGAGTCCGATCTCCGGCCCAAGATATGTATCACATCAACCACTTCCGCTAGTTTAGAGCAAATTTTGCCATGGATATTTTACCATAAAGTAATCGGAGTGACAACCTTCCTTTTGTTTGTTGAAGGAAAAGCTGCAAAGAAAAGTGCTTCGTTAGTTTTGAAATCTATTCCTGGTGTGAAAGTAATATATAGGACTAAAGAACTTGAGGAGAAGCAGGCTAATAGCCGTATTTGGAATGAGAATTGGCTTGCAGGGTTCTTTTACAAGCCCTGCAATTATGAGTTATTTGTCAAGCAGTCGCTTAACATGGAAATGGCTATTGTTATAGCTCGGGATGCTGGGATGGATTGGATCATCCATCTTGACACTGATGAGCTGATACATCCAGTGGGTGCACAAGAGTACTCATTAAGACGATTGCTAGCTGATGTTCCTGGCCATGTTGACATGGTGATTTTTCCAAATTATGAAAGTAGCATTGAGCGGGATGATGTTAAAGATTCTTTTAGCGAGGTCTCAATGTTTAAGAAGAATTATGATCATCTTCCAAAGGATACCTATTTTTTGATGTACAAGGAGGCAACACGTGGTAATCCAAACTATTTTCTTACTTATGGAAATGGAAAATCAGCTGCTCGAGTTCAAGATCATCTCCGCCCCAACGGTGCTCATAGGTGGCATAACTATATGAAGTCTCCAAATGAGATCAAATTAGAAGAAGCTGCTGTTCTGCATTACACGTACACAAAATTTTCAGATTTAACTTCCCGGCGTGACCGTTGTGGCTGCAAACCAACAAAGGATGATGTCAAGAGATGCTTCATGTTGGACTTCGACAGAGACGCTTTTATTATTGCATCAACTGCAACTGAGGAGGAAATGCTGCACTGGTTCCGTGAGCGCGTGGTGTGGGCTGACAGGGATCTGAACTTGAAACTTCTCAGAAAGGGAATCTTGACTCGTATATATGCTCCGATGGTAATCATTCAAAGTTTGAGGGCGTCCGGCGTTTTCAGCTTTGCAATCAGCTCTGCGGCCAAGCGCTCTCACGCACAGACGAAGAATTCTTCCGTTCACGTAACTCCAAATGGAGCTATCTCCGCCGTTGAATCCCACGCTCATCTCCGTCGGAGGGCCCTCCAGTGTTTCCGGACGCCGTCCGCAGCAGCCGTTCCGCCTCTGTCGCCGCCCGGACTTAACAGTCAGGATTTGTCGTATCTTCGATGATCCGGCCAGTTGCCCTTCGGTGTTGCGTGTCTTGGAATGGAAGGTTCCAGAATTCTCCGGATAGCCGATAGCTCCATGACTTCCCTATCGATCTCGCATCAAGCGGGGGAATTGAAAGCGGGTTTGATTGCTTCTTATCTGCCCTCCCTCTCATTGAAAGCATTAGTTGTATAGCTCTGTTCTTCTGGTTTATAATTTCGATTGAATAGACAATGTTTTTACATTCTGCCGATAATAAAAACTGTCATTTTTTTGTAAAGCTGCTTCAAATTTTGTTGGTCATTGATGTGCTTAAGCATGTAAGGATTTGATGATGTCAAATATGGTGCGCTGTCATTTGTCATAGCTACCATGGTTTAGCTTCTGTGTTTCGTGCCTTCGTCCCAATGCCTTCTTTCCCAGCAGTGCGCGGATTGCTGCTTCATTTCATGGATGTTGTCTACCTTCTTGTTCTCTTGATCTTCCAATTTATCTACCTTATAGTGGTGAAGTGAAAAGCAATACAAGTTCGATCCTTGTGTGATGATTGGTGCTAACCTTTGCGACAGGACGGGTAGTTGGACACTCTGGCCCTTACAGGACCCCTCCCCGACAGTTCCTCAGCTACGGAGAGCAGGGCTTCTTTTGTGGCCTCTCGGTGTTAGGCATGAGCAAGGCTGTTTGATAGCTACGAGCGGGGCTTGTCTTCAGGCTTACACTACTACAAAGGCAGATATCCTGATTGTGCTGCTACTTCAGAGGGGCGTCGTAGGCTTGGACGCGGGAGATGGATGGTCTGATTGTTGAGGGTAACTATTTGGCAGCATTGAGGAGGATCAGATGCGTGTGGGGGCGTACCCGGTTGACTCGTGGTGTTGCCCGACATTATGATCACTTCTTCTGATTGTCTACACATTGTGTTTGCTTGTCCACTACAAGTGCGAGTGTAGACATGCTGAGGATATTCGTATTTTTTGGGCTCAACAGGATGATTTTGCACTTTTTGAGGGAATTGACCTCCCTATCAGATTCTTAGATATTTTTGTGACGAGGTTGGGGAATTTGGCCTTGGTTATCTATTGATTTTGATTGGTGATACATATATACATAGGTTAGGGTTAGTTTTCTTGAAGAATATACATGTATATATTTATATATATAT

Network for GWHGAAEX018546

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GTnc

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.020
SRP064423	SRR2545915	Juvenile tuber	11.530
SRP108465	SRR5643513	five period of Gastrodia elata	9.230
	SRR5643514	five period of Gastrodia elata	7.460
	SRR5643515	five period of Gastrodia elata	12.450
	SRR5643524	five period of Gastrodia elata	7.540
	SRR5643525	five period of Gastrodia elata	28.500
	SRR5643528	five period of Gastrodia elata	17.480
	SRR5643658	five period of Gastrodia elata	13.580
	SRR5643659	five period of Gastrodia elata	9.550
	SRR5643660	five period of Gastrodia elata	4.420
	SRR5643661	five period of Gastrodia elata	6.110
	SRR5643662	five period of Gastrodia elata	19.110
	SRR5643663	five period of Gastrodia elata	10.650
	SRR5643664	five period of Gastrodia elata	55.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	25.840
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.360
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.900
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	19.410
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	22.360
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	33.510
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	29.150
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	20.730
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.600
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	23.840
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.470
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.470
SRP279888	Gastro	Gastrodia elata tuber	8.81
	Juven	Juvenile tuber	4.52
	Mother_Gastro	Mother tuber of Gastrodia elata	58.88
	Mother_Juven	Mother tuber of Juvenile	13.47