Detail information of GWHGAAEX018554/evm.TU.scaffold_95.107


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743756672|ref|XP_010918118.1|1.83E-81PREDICTED: uncharacterized protein LOC105042547 [Elaeis guineensis]
Swissprottr|Q9FDX8|HD1_ORYSJ7.00E-09Zinc finger protein HD1
trEMBLtr|A0A067JQ78|A0A067JQ78_JATCU4.00E-69Uncharacterized protein {ECO:0000313|EMBL:KDP22145.1}
TAIRAT4G279009.00E-58CCT motif family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010128925282896851+
Transcript Sequence

Network for GWHGAAEX018554

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06203.13CCT2342767.20E-16
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.040
SRR2545915Juvenile tuber9.730
SRP108465SRR5643513five period of Gastrodia elata61.350
SRR5643514five period of Gastrodia elata44.130
SRR5643515five period of Gastrodia elata31.960
SRR5643524five period of Gastrodia elata36.210
SRR5643525five period of Gastrodia elata26.020
SRR5643528five period of Gastrodia elata21.710
SRR5643658five period of Gastrodia elata33.180
SRR5643659five period of Gastrodia elata17.560
SRR5643660five period of Gastrodia elata12.950
SRR5643661five period of Gastrodia elata17.270
SRR5643662five period of Gastrodia elata23.990
SRR5643663five period of Gastrodia elata14.270
SRR5643664five period of Gastrodia elata22.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.290
SRR6049655Rhizomagastrodiae_C368-T10_good_122.650
SRR6049656Rhizomagastrodiae_C368-T07_good_120.880
SRR6049657Rhizomagastrodiae_C368-T07_good_112.090
SRR6049658Rhizomagastrodiae_C368-T04_good_113.920
SRR6049659Rhizomagastrodiae_C368-T04_good_111.620
SRR6049660Rhizomagastrodiae_C368-T01_good_111.930
SRR6049661Rhizomagastrodiae_C368-T04_good_111.440
SRR6049662Rhizomagastrodiae_C368-T01_good_130.810
SRR6049663Rhizomagastrodiae_C368-T01_good_128.770
SRR6049664Rhizomagastrodiae_C368-T10_good_138.370
SRR6049665Rhizomagastrodiae_C368-T10_good_138.370
SRP279888GastroGastrodia elata tuber 37.37
JuvenJuvenile tuber35.04
Mother_GastroMother tuber of Gastrodia elata 61.26
Mother_JuvenMother tuber of Juvenile 72.12