Detail information of GWHGAAEX018566/evm.TU.scaffold_95.122


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695014602|ref|XP_009394133.1|6.42E-166PREDICTED: protein trichome birefringence-like 38 [Musa acuminata subsp. malaccensis]
Swissprottr|O22960|TBL37_ARATH4.00E-150Protein trichome birefringence-like 37
trEMBLtr|M0SJM6|M0SJM6_MUSAM2.00E-166Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P32120_001}
TAIRAT1G290506.00E-140TRICHOME BIREFRINGENCE-LIKE 38

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010131715983173803-
Transcript Sequence

Network for GWHGAAEX018566

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14416.5PMR5N33852.50E-22
PF13839.5PC-Esterase863511.50E-88
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.520
SRR2545915Juvenile tuber7.520
SRP108465SRR5643513five period of Gastrodia elata16.890
SRR5643514five period of Gastrodia elata17.610
SRR5643515five period of Gastrodia elata12.500
SRR5643524five period of Gastrodia elata14.710
SRR5643525five period of Gastrodia elata26.100
SRR5643528five period of Gastrodia elata66.460
SRR5643658five period of Gastrodia elata27.870
SRR5643659five period of Gastrodia elata8.780
SRR5643660five period of Gastrodia elata7.230
SRR5643661five period of Gastrodia elata6.370
SRR5643662five period of Gastrodia elata7.540
SRR5643663five period of Gastrodia elata9.530
SRR5643664five period of Gastrodia elata4.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.960
SRR6049655Rhizomagastrodiae_C368-T10_good_19.850
SRR6049656Rhizomagastrodiae_C368-T07_good_111.110
SRR6049657Rhizomagastrodiae_C368-T07_good_14.380
SRR6049658Rhizomagastrodiae_C368-T04_good_13.400
SRR6049659Rhizomagastrodiae_C368-T04_good_13.340
SRR6049660Rhizomagastrodiae_C368-T01_good_16.500
SRR6049661Rhizomagastrodiae_C368-T04_good_18.900
SRR6049662Rhizomagastrodiae_C368-T01_good_110.550
SRR6049663Rhizomagastrodiae_C368-T01_good_110.850
SRR6049664Rhizomagastrodiae_C368-T10_good_116.920
SRR6049665Rhizomagastrodiae_C368-T10_good_116.920
SRP279888GastroGastrodia elata tuber 10.18
JuvenJuvenile tuber9.63
Mother_GastroMother tuber of Gastrodia elata 6.30
Mother_JuvenMother tuber of Juvenile 3.90