Detail information of GWHGAAEX018567/evm.TU.scaffold_95.123


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374329661|ref|YP_005079845.1|7.00E-36hypothetical protein PSE_1311 [Pseudovibrio sp. FO-BEG1]
nrgi|743797055|ref|XP_010924886.1|0PREDICTED: uncharacterized protein YNL011C isoform X1 [Elaeis guineensis]
trEMBLtr|M0U879|M0U879_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP11200_001}
TAIRAT2G340906.00E-176maternal effect embryo arrest 18

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010131970043250654-
Transcript Sequence

Network for GWHGAAEX018567

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01933.17UPF0052173561.30E-46
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.630
SRR2545915Juvenile tuber28.150
SRP108465SRR5643513five period of Gastrodia elata5.770
SRR5643514five period of Gastrodia elata9.790
SRR5643515five period of Gastrodia elata6.180
SRR5643524five period of Gastrodia elata6.570
SRR5643525five period of Gastrodia elata3.340
SRR5643528five period of Gastrodia elata2.560
SRR5643658five period of Gastrodia elata4.220
SRR5643659five period of Gastrodia elata3.350
SRR5643660five period of Gastrodia elata2.450
SRR5643661five period of Gastrodia elata2.980
SRR5643662five period of Gastrodia elata2.260
SRR5643663five period of Gastrodia elata2.830
SRR5643664five period of Gastrodia elata2.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.720
SRR6049655Rhizomagastrodiae_C368-T10_good_18.440
SRR6049656Rhizomagastrodiae_C368-T07_good_19.210
SRR6049657Rhizomagastrodiae_C368-T07_good_19.580
SRR6049658Rhizomagastrodiae_C368-T04_good_18.590
SRR6049659Rhizomagastrodiae_C368-T04_good_16.930
SRR6049660Rhizomagastrodiae_C368-T01_good_111.220
SRR6049661Rhizomagastrodiae_C368-T04_good_19.630
SRR6049662Rhizomagastrodiae_C368-T01_good_116.110
SRR6049663Rhizomagastrodiae_C368-T01_good_111.840
SRR6049664Rhizomagastrodiae_C368-T10_good_112.170
SRR6049665Rhizomagastrodiae_C368-T10_good_112.170
SRP279888GastroGastrodia elata tuber 3.21
JuvenJuvenile tuber3.34
Mother_GastroMother tuber of Gastrodia elata 5.10
Mother_JuvenMother tuber of Juvenile 3.28