Detail information of GWHGAAEX018574/evm.TU.scaffold_95.132
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|218782550|ref|YP_002433868.1| | 1.00E-17 | hypothetical protein Dalk_4722 [Desulfatibacillum alkenivorans AK-01] |
| nr | gi|743797997|ref|XP_010925124.1| | 0 | PREDICTED: probable inactive receptor kinase At2g26730 [Elaeis guineensis] |
| Swissprot | tr|O48788|Y2267_ARATH | 0 | Probable inactive receptor kinase At2g26730 (Precursor) |
| trEMBL | tr|M5VWH1|M5VWH1_PRUPE | 0 | Uncharacterized protein {ECO:0000313|EMBL:EMJ05436.1} |
| TAIR | AT2G26730 | 0 | Leucine-rich repeat protein kinase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000101 | 3672017 | 3675180 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018574
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF08263.11 | LRRNT_2 | 26 | 61 | 6.30E-07 |
| PF07714.16 | Pkinase_Tyr | 355 | 619 | 3.60E-31 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-III |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.130 |
| SRR2545915 | Juvenile tuber | 4.400 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.610 |
| SRR5643514 | five period of Gastrodia elata | 13.000 | |
| SRR5643515 | five period of Gastrodia elata | 11.050 | |
| SRR5643524 | five period of Gastrodia elata | 9.190 | |
| SRR5643525 | five period of Gastrodia elata | 12.130 | |
| SRR5643528 | five period of Gastrodia elata | 8.590 | |
| SRR5643658 | five period of Gastrodia elata | 5.060 | |
| SRR5643659 | five period of Gastrodia elata | 3.710 | |
| SRR5643660 | five period of Gastrodia elata | 4.350 | |
| SRR5643661 | five period of Gastrodia elata | 4.830 | |
| SRR5643662 | five period of Gastrodia elata | 5.560 | |
| SRR5643663 | five period of Gastrodia elata | 5.250 | |
| SRR5643664 | five period of Gastrodia elata | 5.370 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.730 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 26.310 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.130 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 12.260 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.320 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.550 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 8.190 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 10.850 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 20.230 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 8.920 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 26.050 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 26.050 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.45 |
| Juven | Juvenile tuber | 3.33 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.47 | |
| Mother_Juven | Mother tuber of Juvenile | 1.53 |