Detail information of GWHGAAEX018579/evm.TU.scaffold_95.137


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41972.00E-46FOG: PPR repeat
nrgi|672146301|ref|XP_008797031.1|7.31E-64PREDICTED: pentatricopeptide repeat-containing protein At2g30780-like [Phoenix dactylifera]
Swissprottr|O49343|PP177_ARATH6.00E-47Pentatricopeptide repeat-containing protein At2g30780
trEMBLtr|M0UPK9|M0UPK9_HORVD2.00E-60Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_12888.3} (Fragment)
TAIRAT2G307802.00E-46Tetratricopeptide repeat (TPR)-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010137646373765227+
Transcript Sequence

Network for GWHGAAEX018579

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module14

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.510
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.190
SRR5643514five period of Gastrodia elata1.440
SRR5643515five period of Gastrodia elata1.240
SRR5643524five period of Gastrodia elata1.550
SRR5643525five period of Gastrodia elata2.810
SRR5643528five period of Gastrodia elata2.320
SRR5643658five period of Gastrodia elata0.290
SRR5643659five period of Gastrodia elata0.150
SRR5643660five period of Gastrodia elata0.170
SRR5643661five period of Gastrodia elata0.510
SRR5643662five period of Gastrodia elata1.370
SRR5643663five period of Gastrodia elata0.650
SRR5643664five period of Gastrodia elata1.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.560
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.140
SRR6049658Rhizomagastrodiae_C368-T04_good_10.180
SRR6049659Rhizomagastrodiae_C368-T04_good_10.620
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.190
SRR6049662Rhizomagastrodiae_C368-T01_good_10.430
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.760
SRR6049665Rhizomagastrodiae_C368-T10_good_10.760
SRP279888GastroGastrodia elata tuber 0.54
JuvenJuvenile tuber0.35
Mother_GastroMother tuber of Gastrodia elata 8.87
Mother_JuvenMother tuber of Juvenile 1.07