Detail information of GWHGAAEX018580/evm.TU.scaffold_95.138


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|4.00E-27hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
nrgi|672198505|ref|XP_008777350.1|0PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Phoenix dactylifera]
Swissprottr|Q39202|RLK1_ARATH0G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 (Precursor)
trEMBLtr|A0A067EZ35|A0A067EZ35_CITSI0Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}
TAIRAT5G609009.00E-178receptor-like protein kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010137945113797331+
Transcript Sequence

Network for GWHGAAEX018580

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01453.23B_lectin801761.90E-15
PF00069.24Pkinase5167783.60E-51
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_SD-2b

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004674Molecular Functionprotein serine/threonine kinase activity
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.920
SRR2545915Juvenile tuber7.450
SRP108465SRR5643513five period of Gastrodia elata30.230
SRR5643514five period of Gastrodia elata15.900
SRR5643515five period of Gastrodia elata28.520
SRR5643524five period of Gastrodia elata21.070
SRR5643525five period of Gastrodia elata26.720
SRR5643528five period of Gastrodia elata35.140
SRR5643658five period of Gastrodia elata26.000
SRR5643659five period of Gastrodia elata19.680
SRR5643660five period of Gastrodia elata17.280
SRR5643661five period of Gastrodia elata22.190
SRR5643662five period of Gastrodia elata26.190
SRR5643663five period of Gastrodia elata23.520
SRR5643664five period of Gastrodia elata26.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.220
SRR6049655Rhizomagastrodiae_C368-T10_good_121.060
SRR6049656Rhizomagastrodiae_C368-T07_good_121.470
SRR6049657Rhizomagastrodiae_C368-T07_good_121.110
SRR6049658Rhizomagastrodiae_C368-T04_good_121.730
SRR6049659Rhizomagastrodiae_C368-T04_good_125.780
SRR6049660Rhizomagastrodiae_C368-T01_good_130.410
SRR6049661Rhizomagastrodiae_C368-T04_good_126.590
SRR6049662Rhizomagastrodiae_C368-T01_good_123.160
SRR6049663Rhizomagastrodiae_C368-T01_good_126.830
SRR6049664Rhizomagastrodiae_C368-T10_good_123.400
SRR6049665Rhizomagastrodiae_C368-T10_good_123.400
SRP279888GastroGastrodia elata tuber 16.05
JuvenJuvenile tuber13.06
Mother_GastroMother tuber of Gastrodia elata 79.12
Mother_JuvenMother tuber of Juvenile 70.88