Gene detail

Detail information of GWHGAAEX018581/evm.TU.scaffold_95.139

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743778391\|ref\|XP_010919655.1\|	0	PREDICTED: uncharacterized protein LOC105043695 isoform X1 [Elaeis guineensis]
trEMBL	tr\|M0RW72\|M0RW72_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P01640_001}
TAIR	AT4G17430	4.00E-149	O-fucosyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000101	3815509	3817589	+

Transcript Sequence
>GWHTAAEX018581 ATGGAGTCGCCATTGAAGAGAATTCGATGGAAAAAGAGGAGCCATCTCTGCAAATCCTACTTTTTCTACGTTTTCCTATCTTTAATCATCGTTTTCTTTATCTCTCTTATCATCATCTTCTCCCCTTCCGCCGATCTCCTCCGTTCATTCCTGCCTTCCAAAACCCTAATAAATGATAGGTTCCAATCTGCCTCAATCCAATGTTGTTTACCGTCGCTCTCCGACGAGCGTTTCTTATGGTTCGCACCTCACAGCGGATTCAGCAACCAGTTGAGTGAACTCAAGAACGCCATTCTCTTCGCCGCCATACTCAACAGAACCCTAATCGTTCCTCCCATTCTGGACCACCACGCTGTTTCCCTAGGCAGCTGTCCCAAGTTCCGGGTTACCAACCCTTCCGATCTCCGTGCGGCTGTTTGGGATCACAGTATGAATCTCATCCGGGAACATAGGTACTTGTCAATGGGTGATATTGTAGATTTGTCTTTAGTAGAGCACATAAAGGTTAAATTGATTGATTTTAGGATATTTTTATCAATGTGGTGTGGTTTCGTTATGGATGAAACTTGCTTGTCGAATTCATATTGCGCACTGTTTAACACGAATTCTACATCAATCTATCCAAGCAGTTATCACAGTTCTCTACCATCTGGTCTATTTAGTAATGTGAACAAATGCATTCGTTTGGTAGAGGAAGATTGCAGGACAACAGTGTGGACTTACCGACAAGGAAATGATGGAAGCTTGGACTCATTTCAGCCAGATGAGCTGTTGCTAAAAAGAAAGAAAATGCCCTATTTTGTCCGGAAGCACAGAGATCTGTACAAGGCTTTTGGTTCTGAAACAGCTCCAATTCTTGCTTTTGGTAGCCTTTTCTCGTCACCTTATAAAGGTTCAGAACTTTATATCGATATCCAGGAAGTGCCCGGAGATCCTCGGATACATTCGCTAATCAAAGATATTAATTTTCTTCCTTTTTCTACGGAAATAATAAATGCTGGAAGAAAATTTTCTCGGAGCAAAATTAAGGAGCCATTTTTATGTGCACAGTTGAGATTGCTGGATGGGCAGTTTAAGAATCATTGGAAGGCTACATTCTCAGAGCTTGAGCAGAAGCTGCAGTCCCTGAAGTCGGAACATTACGGCTTGATTCATATTTTTATAATGACAGATCTTCCAAGACGGAACTGGAGTGGAACTTATCTAGAAAAGCTAGCAAATGATGTTGAATCGTACAAGATCTATACATTGCATGAGAAACATGAGGTTATAGTTCAGACTGCTGAGAGGCTTGTAGCGGCAGCAGAAAATGGTTTAAAGGCTGGTTTTCTTCAGTGGAATTTAGCCTCAGTGTGGAGTAATAGATATTGTGATCAAGCTGTCACTTTGCTGGATGTTCTATTATACATTGAGGAAACTGTGTGCAGCTGTGCTTCGTTGGGGTTTGTTGGAACTGCTGGATCGACTATCGCAGAAAGCATTCTATCAATGAGGAGGAACAATGTGTGCTGATTTTAATGGGAGTGATGAGTTGGCAACAAGGAAAGAGATAAATGGAGAAAATTTTAAATTCTTATATTGACCTTGTCTTGGCACTTAGATGTGCCAACACATCCAGAAATTGTTATTAGGTGCATTGGTTGGATAGTGTAGCAGTGCTTATGGTTAACAGGT

Network for GWHGAAEX018581

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GTnc

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.330
SRP064423	SRR2545915	Juvenile tuber	10.870
SRP108465	SRR5643513	five period of Gastrodia elata	8.150
	SRR5643514	five period of Gastrodia elata	7.200
	SRR5643515	five period of Gastrodia elata	7.910
	SRR5643524	five period of Gastrodia elata	7.160
	SRR5643525	five period of Gastrodia elata	7.440
	SRR5643528	five period of Gastrodia elata	6.760
	SRR5643658	five period of Gastrodia elata	5.970
	SRR5643659	five period of Gastrodia elata	12.270
	SRR5643660	five period of Gastrodia elata	11.600
	SRR5643661	five period of Gastrodia elata	11.380
	SRR5643662	five period of Gastrodia elata	9.310
	SRR5643663	five period of Gastrodia elata	11.870
	SRR5643664	five period of Gastrodia elata	10.690
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	7.390
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.520
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.640
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.720
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.990
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.660
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.610
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.690
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.070
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.840
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.420
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.420
SRP279888	Gastro	Gastrodia elata tuber	8.96
	Juven	Juvenile tuber	9.03
	Mother_Gastro	Mother tuber of Gastrodia elata	6.52
	Mother_Juven	Mother tuber of Juvenile	7.35