Detail information of GWHGAAEX018595/evm.TU.scaffold_96.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|302382628|ref|YP_003818451.1|6.00E-4350S ribosomal protein L14 [Brevundimonas subvibrioides ATCC 15264]
KOGKOG09013.00E-6160S ribosomal protein L14/L17/L23
nrgi|743793001|ref|XP_010923818.1|3.81E-88PREDICTED: 50S ribosomal protein HLP, mitochondrial [Elaeis guineensis]
Swissprottr|Q93Z17|HLP_ARATH1.00E-7050S ribosomal protein HLP, mitochondrial (Precursor)
trEMBLtr|M0SV31|M0SV31_MUSAM3.00E-85Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P02520_001}
TAIRAT5G461603.00E-61Ribosomal protein L14p/L23e family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000091629751631438-
Transcript Sequence

Network for GWHGAAEX018595

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00238.18Ribosomal_L14511683.10E-48
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02874RP-L14, MRPL14, rplN Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0015934Cellular Componentlarge ribosomal subunit
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms103.040
SRR2545915Juvenile tuber101.190
SRP108465SRR5643513five period of Gastrodia elata123.970
SRR5643514five period of Gastrodia elata129.130
SRR5643515five period of Gastrodia elata126.960
SRR5643524five period of Gastrodia elata131.450
SRR5643525five period of Gastrodia elata183.120
SRR5643528five period of Gastrodia elata168.350
SRR5643658five period of Gastrodia elata160.860
SRR5643659five period of Gastrodia elata147.430
SRR5643660five period of Gastrodia elata134.810
SRR5643661five period of Gastrodia elata145.640
SRR5643662five period of Gastrodia elata181.180
SRR5643663five period of Gastrodia elata181.220
SRR5643664five period of Gastrodia elata192.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1240.340
SRR6049655Rhizomagastrodiae_C368-T10_good_1158.530
SRR6049656Rhizomagastrodiae_C368-T07_good_1266.610
SRR6049657Rhizomagastrodiae_C368-T07_good_1255.740
SRR6049658Rhizomagastrodiae_C368-T04_good_1286.300
SRR6049659Rhizomagastrodiae_C368-T04_good_1331.340
SRR6049660Rhizomagastrodiae_C368-T01_good_1292.680
SRR6049661Rhizomagastrodiae_C368-T04_good_1307.660
SRR6049662Rhizomagastrodiae_C368-T01_good_1272.510
SRR6049663Rhizomagastrodiae_C368-T01_good_1276.500
SRR6049664Rhizomagastrodiae_C368-T10_good_1239.130
SRR6049665Rhizomagastrodiae_C368-T10_good_1239.130
SRP279888GastroGastrodia elata tuber 297.26
JuvenJuvenile tuber246.72
Mother_GastroMother tuber of Gastrodia elata 159.90
Mother_JuvenMother tuber of Juvenile 198.64