Detail information of GWHGAAEX018599/evm.TU.scaffold_96.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|170290521|ref|YP_001737337.1|2.00E-28small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8]
KOGKOG00733.00E-111GTP-binding ADP-ribosylation factor-like protein ARL2
nrgi|743856950|ref|XP_010941994.1|2.98E-123PREDICTED: ADP-ribosylation factor-like protein 2 isoform X2 [Elaeis guineensis]
Swissprottr|Q9ZPX1|ARF5_ARATH9.00E-112ADP-ribosylation factor-like protein 2
trEMBLtr|I1IG65|I1IG65_BRADI9.00E-120Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI4G00930.1}
TAIRAT2G183903.00E-111ADP-ribosylation factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000091938321939544+
Transcript Sequence

Network for GWHGAAEX018599

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00025.20Arf101832.70E-69
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms63.400
SRR2545915Juvenile tuber51.970
SRP108465SRR5643513five period of Gastrodia elata41.200
SRR5643514five period of Gastrodia elata47.800
SRR5643515five period of Gastrodia elata41.080
SRR5643524five period of Gastrodia elata46.640
SRR5643525five period of Gastrodia elata59.480
SRR5643528five period of Gastrodia elata69.300
SRR5643658five period of Gastrodia elata60.800
SRR5643659five period of Gastrodia elata38.090
SRR5643660five period of Gastrodia elata40.720
SRR5643661five period of Gastrodia elata34.410
SRR5643662five period of Gastrodia elata48.250
SRR5643663five period of Gastrodia elata37.820
SRR5643664five period of Gastrodia elata38.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_139.500
SRR6049655Rhizomagastrodiae_C368-T10_good_152.860
SRR6049656Rhizomagastrodiae_C368-T07_good_147.660
SRR6049657Rhizomagastrodiae_C368-T07_good_138.730
SRR6049658Rhizomagastrodiae_C368-T04_good_148.150
SRR6049659Rhizomagastrodiae_C368-T04_good_143.770
SRR6049660Rhizomagastrodiae_C368-T01_good_141.540
SRR6049661Rhizomagastrodiae_C368-T04_good_147.980
SRR6049662Rhizomagastrodiae_C368-T01_good_160.480
SRR6049663Rhizomagastrodiae_C368-T01_good_158.110
SRR6049664Rhizomagastrodiae_C368-T10_good_162.200
SRR6049665Rhizomagastrodiae_C368-T10_good_162.200
SRP279888GastroGastrodia elata tuber 41.70
JuvenJuvenile tuber28.56
Mother_GastroMother tuber of Gastrodia elata 80.02
Mother_JuvenMother tuber of Juvenile 51.25