Detail information of GWHGAAEX018602/evm.TU.scaffold_96.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695025595|ref|XP_009400056.1|1.00E-52PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FZ86|PDCB3_ARATH7.00E-41PLASMODESMATA CALLOSE-BINDING PROTEIN 3 (Precursor)
trEMBLtr|M0SWW9|M0SWW9_MUSAM4.00E-53Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P08900_001}
TAIRAT1G186503.00E-40plasmodesmata callose-binding protein 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009111222141125478-
Transcript Sequence

Network for GWHGAAEX018602

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07983.12X821925.20E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.920
SRR2545915Juvenile tuber35.460
SRP108465SRR5643513five period of Gastrodia elata22.820
SRR5643514five period of Gastrodia elata44.230
SRR5643515five period of Gastrodia elata26.050
SRR5643524five period of Gastrodia elata28.300
SRR5643525five period of Gastrodia elata41.530
SRR5643528five period of Gastrodia elata34.630
SRR5643658five period of Gastrodia elata38.020
SRR5643659five period of Gastrodia elata10.610
SRR5643660five period of Gastrodia elata9.710
SRR5643661five period of Gastrodia elata9.220
SRR5643662five period of Gastrodia elata7.490
SRR5643663five period of Gastrodia elata8.800
SRR5643664five period of Gastrodia elata6.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.990
SRR6049655Rhizomagastrodiae_C368-T10_good_164.310
SRR6049656Rhizomagastrodiae_C368-T07_good_152.420
SRR6049657Rhizomagastrodiae_C368-T07_good_129.680
SRR6049658Rhizomagastrodiae_C368-T04_good_124.980
SRR6049659Rhizomagastrodiae_C368-T04_good_112.600
SRR6049660Rhizomagastrodiae_C368-T01_good_130.850
SRR6049661Rhizomagastrodiae_C368-T04_good_124.650
SRR6049662Rhizomagastrodiae_C368-T01_good_170.100
SRR6049663Rhizomagastrodiae_C368-T01_good_143.110
SRR6049664Rhizomagastrodiae_C368-T10_good_180.260
SRR6049665Rhizomagastrodiae_C368-T10_good_180.260
SRP279888GastroGastrodia elata tuber 7.44
JuvenJuvenile tuber57.48
Mother_GastroMother tuber of Gastrodia elata 9.30
Mother_JuvenMother tuber of Juvenile 12.31