Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|209364023\|ref\|YP_001424629.2\|	2.00E-10	glycine-rich RNA-binding protein [Coxiella burnetii Dugway 5J108-111]
KOG	KOG0118	1.00E-81	FOG: RRM domain
nr	gi\|743797048\|ref\|XP_010924885.1\|	1.37E-101	PREDICTED: UBP1-associated protein 2C-like [Elaeis guineensis]
Swissprot	tr\|Q9LKA4\|UBA2C_ARATH	3.00E-82	UBP1-associated protein 2C
trEMBL	tr\|H9AWW7\|H9AWW7_ELAGV	1.00E-97	RBP42 {ECO:0000313\|EMBL:AFC89654.1}
TAIR	AT3G15010	1.00E-81	RNA-binding (RRM/RBD/RNP motifs) family protein

Scaffold	Start	End	Strand
GWHAAEX00000091	1194738	1195496	+

Transcript Sequence
>GWHTAAEX018603 ATGGGCTGTTCTTCAACGAAGCTGCGCAAGGCCGACGAGAATGGTGCCGTGGCAATCTCTTCACCTTTGGAAAACCTCACCCCCGCAGACGCTCGCAAGATCTTAAAGTCCTTTGATTCGGAGCAGCTCATCGGCATCATCGCCGACGCCATGTGCCGATATTCCGGCATTCTTGACGCAGTGCGCGTCGTCGCCGACGATGATCCCTCCCAGCGCAAGCTCTTCATACGTCGCTTAGGCTCTGACACCACCACGGAGAAGCTCCGCTCAGTCTTCTCCAAGTACGGCGAGCTCAAGAACGCCGAAGTTATCTCTGACAGAGAAACCGGAAAGAGCAAGGGCTATGGTTTCGTGACCTTCCGCCATGCCGATTGCGCTCTTCTTTCCCTAAAGGAGCCCAGCAAGAGGATTGATGGTCGGATGACAGTTGCCCAGCTTGCTTCTGATGTTTCCCAGCGGAAGATCTTTATCGCCAATGTTTCTCCTGACATTCTTCCTGATCGCCTTCTTGCCTTCTTCAGCTCATATGGTGAGATAGCGAAAGGTCCGATAGGTCTTGATAAACAGACGGGAAATTTCAGGGGTTATGCCTTGATCGTTTACAAAACTGCAGAGTCTGCTCGAGCAGCTCTAGTTGAACCTGTAAAGAATATTGATGGGAATGTTTTGCAGTGCATGCTGGCCAGTGATGGCAAAAAAGGCAGAACTGAGGCAGCTGGAATTGATAGCCATGTTGAAGGGAAGGGAATGGCTTCTTAG

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation
Module6

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00076.21	RRM_1	74	131	4.40E-15
PF00076.21	RRM_1	155	222	9.10E-10

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K12741	HNRNPA1_3	Spliceosome	map03040

GO term	Ontology	Name
GO:0003676	Molecular Function	nucleic acid binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.690
SRP064423	SRR2545915	Juvenile tuber	5.300
SRP108465	SRR5643513	five period of Gastrodia elata	0.130
	SRR5643514	five period of Gastrodia elata	0.100
	SRR5643515	five period of Gastrodia elata	0.240
	SRR5643524	five period of Gastrodia elata	0.000
	SRR5643525	five period of Gastrodia elata	0.130
	SRR5643528	five period of Gastrodia elata	0.000
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	0.110
	SRR5643660	five period of Gastrodia elata	0.000
	SRR5643661	five period of Gastrodia elata	0.000
	SRR5643662	five period of Gastrodia elata	0.000
	SRR5643663	five period of Gastrodia elata	0.270
	SRR5643664	five period of Gastrodia elata	0.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.470
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.080
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.240
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.020
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.720
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.320
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.880
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.340
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.190
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.050
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.350
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.350
SRP279888	Gastro	Gastrodia elata tuber	10.91
	Juven	Juvenile tuber	0.11
	Mother_Gastro	Mother tuber of Gastrodia elata	4.05
	Mother_Juven	Mother tuber of Juvenile	0.00