Detail information of GWHGAAEX018604/evm.TU.scaffold_96.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392382816|ref|YP_005032013.1|2.00E-94putative zinc protease (mpp-like) [Azospirillum brasilense Sp245]
KOGKOG09600Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily)
nrgi|672137971|ref|XP_008792725.1|0PREDICTED: probable mitochondrial-processing peptidase subunit beta [Phoenix dactylifera]
Swissprottr|Q42290|MPPB_ARATH0Probable mitochondrial-processing peptidase subunit beta (Precursor)
trEMBLtr|M0SSR4|M0SSR4_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P28020_001}
TAIRAT3G020900Insulinase (Peptidase family M16) protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009112187161253685-
Transcript Sequence

Network for GWHGAAEX018604

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00675.19Peptidase_M16972433.90E-52
PF05193.20Peptidase_M16_C2514368.40E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0004222Molecular Functionmetalloendopeptidase activity
GO:0046872Molecular Functionmetal ion binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.660
SRR2545915Juvenile tuber19.910
SRP108465SRR5643513five period of Gastrodia elata32.190
SRR5643514five period of Gastrodia elata51.290
SRR5643515five period of Gastrodia elata35.200
SRR5643524five period of Gastrodia elata46.400
SRR5643525five period of Gastrodia elata26.200
SRR5643528five period of Gastrodia elata36.110
SRR5643658five period of Gastrodia elata26.100
SRR5643659five period of Gastrodia elata38.880
SRR5643660five period of Gastrodia elata38.700
SRR5643661five period of Gastrodia elata40.700
SRR5643662five period of Gastrodia elata33.090
SRR5643663five period of Gastrodia elata41.720
SRR5643664five period of Gastrodia elata31.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.680
SRR6049655Rhizomagastrodiae_C368-T10_good_156.240
SRR6049656Rhizomagastrodiae_C368-T07_good_149.400
SRR6049657Rhizomagastrodiae_C368-T07_good_132.120
SRR6049658Rhizomagastrodiae_C368-T04_good_149.790
SRR6049659Rhizomagastrodiae_C368-T04_good_145.250
SRR6049660Rhizomagastrodiae_C368-T01_good_141.370
SRR6049661Rhizomagastrodiae_C368-T04_good_141.970
SRR6049662Rhizomagastrodiae_C368-T01_good_166.210
SRR6049663Rhizomagastrodiae_C368-T01_good_159.030
SRR6049664Rhizomagastrodiae_C368-T10_good_167.230
SRR6049665Rhizomagastrodiae_C368-T10_good_167.230
SRP279888GastroGastrodia elata tuber 34.00
JuvenJuvenile tuber31.97
Mother_GastroMother tuber of Gastrodia elata 28.63
Mother_JuvenMother tuber of Juvenile 31.65