Detail information of GWHGAAEX018630/evm.TU.scaffold_97.5


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|332666557|ref|YP_004449345.1|1.00E-131beta-galactosidase [Haliscomenobacter hydrossis DSM 1100]
KOGKOG06260Beta-glucosidase, lactase phlorizinhydrolase, and related proteins
nrgi|84316678|gb|ABC55715.1|0beta-mannosidase 4 [Oncidium hybrid cultivar]
Swissprottr|Q7XSK0|BGL18_ORYSJ0Beta-glucosidase 18 (Precursor)
trEMBLtr|Q2MV13|Q2MV13_ONCHC0Beta-mannosidase 4 {ECO:0000313|EMBL:ABC55715.1}
TAIRAT1G618200beta glucosidase 46

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000102105458111105+
Transcript Sequence

Network for GWHGAAEX018630

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00232.17Glyco_hydro_1284961.10E-154
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH1

KEGG pathway

KO Enzyme pathway mapID
K05350bglB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500
Cyanoamino acid metabolismmap00460
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms395.840
SRR2545915Juvenile tuber121.960
SRP108465SRR5643513five period of Gastrodia elata104.590
SRR5643514five period of Gastrodia elata40.740
SRR5643515five period of Gastrodia elata56.470
SRR5643524five period of Gastrodia elata48.440
SRR5643525five period of Gastrodia elata553.620
SRR5643528five period of Gastrodia elata758.620
SRR5643658five period of Gastrodia elata1776.440
SRR5643659five period of Gastrodia elata9.530
SRR5643660five period of Gastrodia elata8.150
SRR5643661five period of Gastrodia elata6.050
SRR5643662five period of Gastrodia elata12.590
SRR5643663five period of Gastrodia elata9.340
SRR5643664five period of Gastrodia elata19.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1161.730
SRR6049655Rhizomagastrodiae_C368-T10_good_1163.020
SRR6049656Rhizomagastrodiae_C368-T07_good_1140.310
SRR6049657Rhizomagastrodiae_C368-T07_good_1672.140
SRR6049658Rhizomagastrodiae_C368-T04_good_1939.310
SRR6049659Rhizomagastrodiae_C368-T04_good_11392.750
SRR6049660Rhizomagastrodiae_C368-T01_good_1473.800
SRR6049661Rhizomagastrodiae_C368-T04_good_1778.650
SRR6049662Rhizomagastrodiae_C368-T01_good_1120.960
SRR6049663Rhizomagastrodiae_C368-T01_good_197.270
SRR6049664Rhizomagastrodiae_C368-T10_good_158.150
SRR6049665Rhizomagastrodiae_C368-T10_good_158.150
SRP279888GastroGastrodia elata tuber 17.16
JuvenJuvenile tuber16.03
Mother_GastroMother tuber of Gastrodia elata 1,314.03
Mother_JuvenMother tuber of Juvenile 243.27