Detail information of GWHGAAEX018638/evm.TU.scaffold_97.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10120Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain
nrgi|672135789|ref|XP_008791569.1|0PREDICTED: synaptotagmin-3-like [Phoenix dactylifera]
Swissprottr|Q7XA06|SYT3_ARATH0Synaptotagmin-3
trEMBLtr|I1GWC0|I1GWC0_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G33150.1}
TAIRAT1G200800Calcium-dependent lipid-binding (CaLB domain) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000102409012419346-
Transcript Sequence

Network for GWHGAAEX018638

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF17047.4SMP_LBD672322.00E-11
PF00168.29C22613602.90E-21
PF00168.29C24275291.50E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008289Molecular Functionlipid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.610
SRR2545915Juvenile tuber12.630
SRP108465SRR5643513five period of Gastrodia elata6.220
SRR5643514five period of Gastrodia elata12.740
SRR5643515five period of Gastrodia elata8.910
SRR5643524five period of Gastrodia elata9.790
SRR5643525five period of Gastrodia elata39.200
SRR5643528five period of Gastrodia elata30.490
SRR5643658five period of Gastrodia elata54.170
SRR5643659five period of Gastrodia elata9.650
SRR5643660five period of Gastrodia elata13.860
SRR5643661five period of Gastrodia elata8.880
SRR5643662five period of Gastrodia elata10.110
SRR5643663five period of Gastrodia elata13.950
SRR5643664five period of Gastrodia elata18.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.230
SRR6049655Rhizomagastrodiae_C368-T10_good_111.360
SRR6049656Rhizomagastrodiae_C368-T07_good_19.940
SRR6049657Rhizomagastrodiae_C368-T07_good_16.270
SRR6049658Rhizomagastrodiae_C368-T04_good_16.290
SRR6049659Rhizomagastrodiae_C368-T04_good_15.610
SRR6049660Rhizomagastrodiae_C368-T01_good_14.320
SRR6049661Rhizomagastrodiae_C368-T04_good_14.990
SRR6049662Rhizomagastrodiae_C368-T01_good_118.570
SRR6049663Rhizomagastrodiae_C368-T01_good_115.940
SRR6049664Rhizomagastrodiae_C368-T10_good_116.050
SRR6049665Rhizomagastrodiae_C368-T10_good_116.050
SRP279888GastroGastrodia elata tuber 13.07
JuvenJuvenile tuber14.85
Mother_GastroMother tuber of Gastrodia elata 32.41
Mother_JuvenMother tuber of Juvenile 26.94