Detail information of GWHGAAEX018646/evm.TU.scaffold_97.24


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15964328|ref|NP_384681.1|2.00E-43ribitol type dehydrogenase [Sinorhizobium meliloti 1021]
KOGKOG12101.00E-134Predicted 3-ketosphinganine reductase
nrgi|695080359|ref|XP_009387639.1|9.98E-158PREDICTED: 3-ketodihydrosphingosine reductase-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q0WRJ2|TC10A_ARATH5.00E-1353-dehydrosphinganine reductase TSC10A
trEMBLtr|M0UAK8|M0UAK8_MUSAM4.00E-158Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP19490_001}
TAIRAT3G060601.00E-134NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000102574926577543-
Transcript Sequence

Network for GWHGAAEX018646

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00106.24adh_short402313.60E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04708KDSR Metabolic pathways map01100
Sphingolipid metabolismmap00600

Gene Ontology

GO term OntologyName
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms46.100
SRR2545915Juvenile tuber43.840
SRP108465SRR5643513five period of Gastrodia elata67.610
SRR5643514five period of Gastrodia elata79.490
SRR5643515five period of Gastrodia elata73.640
SRR5643524five period of Gastrodia elata77.030
SRR5643525five period of Gastrodia elata61.520
SRR5643528five period of Gastrodia elata62.550
SRR5643658five period of Gastrodia elata75.470
SRR5643659five period of Gastrodia elata48.620
SRR5643660five period of Gastrodia elata45.590
SRR5643661five period of Gastrodia elata48.670
SRR5643662five period of Gastrodia elata49.610
SRR5643663five period of Gastrodia elata50.300
SRR5643664five period of Gastrodia elata51.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_179.050
SRR6049655Rhizomagastrodiae_C368-T10_good_189.550
SRR6049656Rhizomagastrodiae_C368-T07_good_179.640
SRR6049657Rhizomagastrodiae_C368-T07_good_178.520
SRR6049658Rhizomagastrodiae_C368-T04_good_187.000
SRR6049659Rhizomagastrodiae_C368-T04_good_197.270
SRR6049660Rhizomagastrodiae_C368-T01_good_172.220
SRR6049661Rhizomagastrodiae_C368-T04_good_181.520
SRR6049662Rhizomagastrodiae_C368-T01_good_178.210
SRR6049663Rhizomagastrodiae_C368-T01_good_177.830
SRR6049664Rhizomagastrodiae_C368-T10_good_1101.840
SRR6049665Rhizomagastrodiae_C368-T10_good_1101.840
SRP279888GastroGastrodia elata tuber 52.91
JuvenJuvenile tuber47.75
Mother_GastroMother tuber of Gastrodia elata 106.98
Mother_JuvenMother tuber of Juvenile 58.02