Gene detail

Detail information of GWHGAAEX018647/evm.TU.scaffold_97.25

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|672188633\|ref\|XP_008813630.1\|	PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Phoenix dactylifera]
Swissprot	tr\|F4JSE7\|EDR2_ARATH	Protein ENHANCED DISEASE RESISTANCE 2
trEMBL	tr\|M0SZH8\|M0SZH8_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P17990_001}
TAIR	AT5G45560	Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000102	579312	627878	-

Transcript Sequence
>GWHTAAEX018647 ATGTCGAAGGTAGTGTACGAGGGATGGATGGTGCGCTATGGTCGGAGGAAGATCGGCCGCTCCTTCATACACATGCGGTACTTCGTACTTGAGACTAGGGTTCTTGCTTATTACAAGAGGAAGCCCCAGGGTAACATAGTTCCTATCAAAACTCTTTTCATAGATGGGAATTGTAGGGTGGAAGATAGAGGTCTAAAGATTCACCATGGCCATATGGTATATGTACTCTGTGTATACAACAAAAAGGACAAGTACCATCGAATTATGATGGCAGCATTCAACATTCAGGAGGCTCTGATATGGAAGGAGAAAATTGAATCTGTGATTGATCAGCAAGATTTAAACACAACTAGTGCAAGTATGGTTCATTCATCATTTCTTGCCAAAGCTGGCATTAATGCTGATAGGAATGCTTCTTCATCTGACAGGGAAAGCCTGGCAAGTGCTGAAGATGAAGAAGAGAACAGCCGTGCATTGATACGCAGGACAACCATTGGAAATGGACCTCCTGAATCAGTGCTTGATTGGACACGTGAGGGTGATTCGGTGTTAACAAATCAGAGTACTTCAGATCAAGTTTTTTCTAGAAGGCATTGGCGCCTTGTCAGATGCCAGAATGGTCTTCGCATTTTTGAAGAGCTTTCAGAAACTGATTACCTTCCACGAAGTTGTAGTAGAGCAATGAAAGCTGTTGGTGTAGTGGAGGCTACTTGTGAAGCAATATTTGAACTTGTGATGTGCATGGATGGAACACGCTTTGAGTGGGACTGCAGCTTCCAATATGGCAGTTTAGTAGAGGAGGTTGATGGACATACTGCAATATTATATCATAGACTGCAACTGGGATGGTTTTCCATGTTTGTGTGGCCACGGGACCTTTGCTATGTGAGATACTGGAGACGTAATGATGATGGAAGCTATGTTGTGCTGTTTCGGTCTAGAGAGCATCCAAATTGTGGCCCACAGCCAGGATTTGTCAGAGCTCATATTGAGAGCGGTGGATTCAACATTTCTCCTCTAAAATCACGTAATGGGAGAACCCGAGCAAAGGTTCAGCATCTTATGCAAATTGATTTGAAAGGATGGGGAGTTGGCTATTCTCCATCATTTCAGCAACATTGTTTGCTTCAGATGTTGAACGGAGTAGCTGGATTGCGTGAATGGTTTTCCCAAACTGATGAAACCCGTACTGTCCCAAGAATACCAGTTATGATGAGCATTGGCTCTGGTTCTGTTTTGTCCAAGAAGGGAAAGAAAAACCAGGATAATTCTAATCATTCAGTTCCTGTGGATGTACTGTCTTCTGCTGGAGGACATTCTATGTTATTGGACGAAGAAACAGATGATGATGAAGATTGCCAAATTCCTGAACCTGAAGAAGTGAAGATGGACTCTGTCAAGTTTGCTAATGCTTTGAAGCAAGCAGATGAGGATCCATTGGATCAACTTGATTTGTCATCCTTTTCTGGAAATTTACGATGTAATGACCGTGATAATAGTCGAGATTGTTGGAGAATACCTGATGTAAACAATTTCAAAGTTCGCAGCAAGACTTTTTGTTATGACAAAACAAAGATACCTGCAGGCAAGCCTCTTATGAAGCTTGTGGCGGTTGATTGGTTTAAGGATGTGAGAAGGATAGACCATGTTGCTAGGAGACAAGGGTGTGCGGCTCAGGTTGCTGCTGAGAAAGGGCTGTTCACTTTGGTTATAAATGTTCAAGTTCCAGGTTCAACACATTACAGTATGGTCTTTTATTTTGTGTCAAAACACCTTGCTCCTGGGTCATTGCTACAACGTTTTGTTGATGGTGATGATGAATTTAGGAACAGTAGATTAAAGCTAATTCCTTCCGTTCCTAAGGGTTCTTGGATAGTTCGCCAGAGTGTTGGAAGCACCCCATGCATATTAGGGAAAGCAGTTGATTGCACGTACATTCGTGGCTCAAAGTACTTGGAAATTGATGTTGATATTGGTTCTTCCACTGTAGCTAATGGAGTCCTGGGGCTTGTATTTGGTGTAATTACTACTTTGGTAGTTGACATGGCTTTTCTTATACAGGCAAACACTTACGAGGAGCTTCCCGAGCGGGTCATCGGAGCTGTTCGTGTTTCGCACCTTGAATTGTCATCTGCTATAGTTCCACTACTTGAGCATAACCCATCTGCCACTGAATGA

Network for GWHGAAEX018647

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01852.18	START	225	373	1.60E-22
PF07059.11	DUF1336	504	707	2.70E-69

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008289	Molecular Function	lipid binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	53.440
SRP064423	SRR2545915	Juvenile tuber	49.660
SRP108465	SRR5643513	five period of Gastrodia elata	43.110
	SRR5643514	five period of Gastrodia elata	40.030
	SRR5643515	five period of Gastrodia elata	36.720
	SRR5643524	five period of Gastrodia elata	39.810
	SRR5643525	five period of Gastrodia elata	33.020
	SRR5643528	five period of Gastrodia elata	32.670
	SRR5643658	five period of Gastrodia elata	36.030
	SRR5643659	five period of Gastrodia elata	28.770
	SRR5643660	five period of Gastrodia elata	31.630
	SRR5643661	five period of Gastrodia elata	28.280
	SRR5643662	five period of Gastrodia elata	29.010
	SRR5643663	five period of Gastrodia elata	28.540
	SRR5643664	five period of Gastrodia elata	30.160
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	47.080
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	37.140
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	44.430
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	43.310
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	46.280
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	49.680
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	42.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	37.730
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	40.920
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	44.390
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	52.520
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	52.520
SRP279888	Gastro	Gastrodia elata tuber	44.65
	Juven	Juvenile tuber	56.90
	Mother_Gastro	Mother tuber of Gastrodia elata	38.37
	Mother_Juven	Mother tuber of Juvenile	58.39