Gene detail

Database	Orthologs	E value	Annotation
KOG	KOG4197	3.00E-24	FOG: PPR repeat
nr	gi\|695024466\|ref\|XP_009399449.1\|	5.21E-39	PREDICTED: putative pentatricopeptide repeat-containing protein At1g31840 isoform X2 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9C6S6\|PPR67_ARATH	1.00E-24	Putative pentatricopeptide repeat-containing protein At1g31840
trEMBL	tr\|D7U3Z2\|D7U3Z2_VITVI	2.00E-35	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI37461.3}
trEMBL	tr\|D7U3Z2\|D7U3Z2_VITVI	3.00E-15	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI37461.3}
trEMBL	tr\|D7U3Z2\|D7U3Z2_VITVI	7.00E-15	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI37461.3}
trEMBL	tr\|D7U3Z2\|D7U3Z2_VITVI	2.00E-14	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI37461.3}
trEMBL	tr\|D7U3Z2\|D7U3Z2_VITVI	2.00E-14	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI37461.3}
trEMBL	tr\|D7U3Z2\|D7U3Z2_VITVI	6.00E-12	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI37461.3}
trEMBL	tr\|D7U3Z2\|D7U3Z2_VITVI	1.00E-11	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI37461.3}
trEMBL	tr\|D7U3Z2\|D7U3Z2_VITVI	2.00E-11	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI37461.3}
TAIR	AT1G31840	3.00E-24	Tetratricopeptide repeat (TPR)-like superfamily protein

Scaffold	Start	End	Strand
GWHAAEX00000102	736396	736947	+

Transcript Sequence
>GWHTAAEX018651 ATGAAACAAACAATTTTTGTGGGATTTTTTTCCAGGAAATTGGTTACTACTTTTGTAAAGATGATAGATTTTCATAGAAATTTGGCTGAAAAAAATCTTTTACCAAAAATTTGTAAGGTTAATCAATTTTTAAATGGCTTATGCATTAGACATCAACTTTCTGCTGTTCTTGATTTGTTTGATTTAATCTTGGAGAAGGGACCTAAACCCAGTGTTATTACCTATAGCATATTAGTTCGTTGTTTTTGCTATGAGGGTAGATTAGATGATGCATCCAAAGCTTTCGATATGATGTTGGATATGGGAATAAATCCTGATCTGATACTCTATTCTATTCTAATCGATGGGTTTTGCAAGGACGGTAGAGTGGAGGAGGGATGCCAGATACTTGATAGGGCCTTGAAGTTTGGGATTAAGTCTGATGTTGTTCTGTTCAGTTCTCTTATTAATGGTTATGCTAGAATTGGTAGAGCATTGAGCAGGCCTTCAGGCTGTTTAACACAATGGCGAAGGAAGGGGTGGCACCGAATGCTGTTAGTTACAGCACATTAA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation
Module4

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12854.6	PPR_1	66	98	1.80E-10
PF12854.6	PPR_1	101	132	1.40E-10
PF01535.19	PPR	143	157	1.1

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
--	--	--	--

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.460
SRP064423	SRR2545915	Juvenile tuber	5.730
SRP108465	SRR5643513	five period of Gastrodia elata	4.890
	SRR5643514	five period of Gastrodia elata	3.380
	SRR5643515	five period of Gastrodia elata	3.560
	SRR5643524	five period of Gastrodia elata	3.800
	SRR5643525	five period of Gastrodia elata	4.100
	SRR5643528	five period of Gastrodia elata	4.970
	SRR5643658	five period of Gastrodia elata	7.350
	SRR5643659	five period of Gastrodia elata	2.570
	SRR5643660	five period of Gastrodia elata	2.080
	SRR5643661	five period of Gastrodia elata	1.910
	SRR5643662	five period of Gastrodia elata	1.150
	SRR5643663	five period of Gastrodia elata	2.310
	SRR5643664	five period of Gastrodia elata	1.230
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.420
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.670
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.330
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.230
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.410
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.830
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.390
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.940
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.090
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.770
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.770
SRP279888	Gastro	Gastrodia elata tuber	3.48
	Juven	Juvenile tuber	7.42
	Mother_Gastro	Mother tuber of Gastrodia elata	5.32
	Mother_Juven	Mother tuber of Juvenile	13.13