Detail information of GWHGAAEX018656/evm.TU.scaffold_97.35


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG22380Uncharacterized conserved protein TEX2, contains PH domain
nrgi|743834732|ref|XP_010935611.1|0PREDICTED: testis-expressed sequence 2 protein-like [Elaeis guineensis]
trEMBLtr|M0TEL6|M0TEL6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P04260_001}
TAIRAT1G178200Putative integral membrane protein conserved region (DUF2404)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000102841557875029+
Transcript Sequence

Network for GWHGAAEX018656

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0008289Molecular Functionlipid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.910
SRR2545915Juvenile tuber24.720
SRP108465SRR5643513five period of Gastrodia elata17.160
SRR5643514five period of Gastrodia elata17.510
SRR5643515five period of Gastrodia elata18.080
SRR5643524five period of Gastrodia elata15.490
SRR5643525five period of Gastrodia elata32.820
SRR5643528five period of Gastrodia elata31.700
SRR5643658five period of Gastrodia elata34.230
SRR5643659five period of Gastrodia elata18.540
SRR5643660five period of Gastrodia elata22.880
SRR5643661five period of Gastrodia elata21.460
SRR5643662five period of Gastrodia elata22.830
SRR5643663five period of Gastrodia elata23.310
SRR5643664five period of Gastrodia elata22.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.530
SRR6049655Rhizomagastrodiae_C368-T10_good_116.050
SRR6049656Rhizomagastrodiae_C368-T07_good_117.770
SRR6049657Rhizomagastrodiae_C368-T07_good_118.340
SRR6049658Rhizomagastrodiae_C368-T04_good_116.900
SRR6049659Rhizomagastrodiae_C368-T04_good_119.270
SRR6049660Rhizomagastrodiae_C368-T01_good_118.320
SRR6049661Rhizomagastrodiae_C368-T04_good_116.990
SRR6049662Rhizomagastrodiae_C368-T01_good_118.030
SRR6049663Rhizomagastrodiae_C368-T01_good_118.530
SRR6049664Rhizomagastrodiae_C368-T10_good_118.640
SRR6049665Rhizomagastrodiae_C368-T10_good_118.640
SRP279888GastroGastrodia elata tuber 19.56
JuvenJuvenile tuber21.18
Mother_GastroMother tuber of Gastrodia elata 28.26
Mother_JuvenMother tuber of Juvenile 21.05