Gene detail

Detail information of GWHGAAEX018659/evm.TU.scaffold_97.38

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|410667296\|ref\|YP_006919667.1\|	3.00E-133	pyruvate kinase Pyk [Thermacetogenium phaeum DSM 12270]
KOG	KOG2323	0	Pyruvate kinase
nr	gi\|475653385\|gb\|AGI60277.1\|	0	pyruvate kinase [Dendrobium catenatum]
Swissprot	tr\|P22200\|KPYC_SOLTU	0	Pyruvate kinase, cytosolic isozyme
trEMBL	tr\|A0A0A0KV32\|A0A0A0KV32_CUCSA	0	Uncharacterized protein {ECO:0000313\|EMBL:KGN51576.1}
TAIR	AT5G08570	0	Pyruvate kinase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000102	918450	929532	+

Transcript Sequence
>GWHTAAEX018659 ATTTCAGTGGCTGACAGCCAGTGAGCGGTTTCGTTCGAAGGAGATATAGGCTTGAAGAGCATCAGGAGAGATCGTTTCTTATTAGCCTAAAAGTTTATCCAGGGAGAATTGATTTCTCGAGATGGCTAACATTGACATAGAAGGGATATTGAAAGAGCTTCCCAGCAATGGGAGGATGCCGAAGACAAAAATCGTGTGTACGCTGGGACCGGCGTCGAGGTCGGTGCTGATGCTGGAGAAATTGCTGAGGGCAGGCATGAATGTGGCCAGGTTTAATTTCTCCCATGGCTCGCACGAATATCACCAGGAGACTCTTGAGAACCTCAAGATCTCTATGCAGAATACTCAGATCCTCTGCGCCGTCATGCTTGACACCAAGGGGCCTGAGATTCGAACTGGTTTCCTAAAAGATGGGAAGCCCATCCAATTGAAAGAAGGTGAAGAGATCAACGTGTCCACTGATTACAGCATCAAGGGAGATGAGAACACTATTTCGATGAGCTACAAGAAACTTCCTGTAGATCTGAAGCCCGGAAACACCATCTTGTGCGCCGATGGTACCATAAGCCTGACAGTCCTATCTTGTCACCCTGAGACCGGAATTGTGAGATGCCGCTGTGAGAACACGGCCATGCTCGGTGAGAGGAAGAATGTTAATCTCCCAGGAATAGTGGTGGACCTTCCTACTCTTACCGACAAAGACAAGGAGGACATCTTGGGCTGGGGAATTCCCAATGGCATTGATATGATTGCCTTGTCTTTCGTCCGTAAAGGCTCCGACCTCGTTAATGTACGAGAGCTACTCGGACCGCACGCAAAGCGCATAAAGCTCATGTCCAAGGTTGAGAATCAAGAGGGCGTGATAAACTTTGATGAAATCCTGAGGGAGACGGATGCATTCATGGTTGCCAGAGGGGATCTTGGGATGGAGATCCCGGTTGAGAAGATCTTCCTCGCTCAGAAGATGATGATCTACAAGTGCAATATCGCGGGCAAGTCCGTTGTCACTGCCACCCAGATGCTCGAATCGATGATCAAATCACCGCGGCCGACCCGTGCGGAAGCCACTGACGTCGCGAACGCCGTCCTTGACGGCACGGACTGCGTCATGCTCAGCGGGGAAAGCGCCGCCGGAGCCTACCCAGAGCTGGCGGTGCAAATTATGGCCAAGATATGCCTCGAAGCAGAGTCTTCTCTCGACTACGAAGCCATCTTCAAGGCGATGATAAAGGCAACCCCCCTTCCCATGAGCCCGCTTGAGAGCCTCGCCTCCTCTGCCGTGCGCACGGCAAACAAGGCAAAGGCTGTCCTGATCGTCGTGTTGACTCGGGGCGGGACAACAGCGAAGCTCGTGGCCAAGTACCGTCCGGCCATCCCAATTCTGTCAGTGGTGGTCCCTGTGCTGACCACCGACACATTCGATTGGTCGATCAGCGATGAGAGCCCTGCAAGGCATAGCCTGATCCACAGGGGGCTGATCCCACTCCTCGCGGAGGGCTCTGCCAAGGCCACTGACGAGGAGTCCACCGAAGTCATATTGGAAGCCTCTTTGAAATCCGCCGTCGATAGGAAGCTCTGCAGCCCCGGTGATGCTGTGGTTGTCATGCATCGAATTGGGATTGCTTCGGTCATCAAACTCTGCATTGTGAAGTGAAGGTGCCTGCGGTGTTCTATGCTGAGATGTAGCAAGTTTTGTTATACCATATATTATTATTTTACTGATTCTACCATATTTATATTTAACTGCATTCCTTTTTGTTTCAGCTTATATAAATGAGCCATTTTGCTGATTTTCTTGGGTGTTTGTTTATACTAAACGCAGAGGAGGAAGTGCGTTTTGTTTCTGCTGGCTTGATATTTGTATTCCATAAGACTTTATTAAGGTGCTTATAAATTCTCCATAATGGATTTTGATGGAATTAGGCAGCCTTTTCTATTTTGTCATATGTTCTCTGATTCTAGTTCTTGCTCA

Network for GWHGAAEX018659

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00224.20	PK	20	364	3.80E-157
PF02887.15	PK_C	380	499	1.50E-22

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00873	PK, pyk	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Biosynthesis of antibiotics	map01130
		Carbon metabolism	map01200
		Biosynthesis of amino acids	map01230
		Glycolysis / Gluconeogenesis	map00010
		Pyruvate metabolism	map00620
		Purine metabolism	map00230
		Glucagon signaling pathway	map04922

Gene Ontology

GO term	Ontology	Name
GO:0006096	Biological Process	glycolytic process
GO:0004743	Molecular Function	pyruvate kinase activity
GO:0030955	Molecular Function	potassium ion binding
GO:0000287	Molecular Function	magnesium ion binding
GO:0003824	Molecular Function	catalytic activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	65.030
SRP064423	SRR2545915	Juvenile tuber	92.930
SRP108465	SRR5643513	five period of Gastrodia elata	88.920
	SRR5643514	five period of Gastrodia elata	93.130
	SRR5643515	five period of Gastrodia elata	100.750
	SRR5643524	five period of Gastrodia elata	95.660
	SRR5643525	five period of Gastrodia elata	45.600
	SRR5643528	five period of Gastrodia elata	98.150
	SRR5643658	five period of Gastrodia elata	32.360
	SRR5643659	five period of Gastrodia elata	164.230
	SRR5643660	five period of Gastrodia elata	171.670
	SRR5643661	five period of Gastrodia elata	175.090
	SRR5643662	five period of Gastrodia elata	164.560
	SRR5643663	five period of Gastrodia elata	163.670
	SRR5643664	five period of Gastrodia elata	138.300
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	119.220
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	123.140
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	114.820
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	98.940
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	82.740
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	87.840
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	92.680
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	90.160
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	128.420
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	111.250
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	146.790
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	146.790
SRP279888	Gastro	Gastrodia elata tuber	127.53
	Juven	Juvenile tuber	145.63
	Mother_Gastro	Mother tuber of Gastrodia elata	101.02
	Mother_Juven	Mother tuber of Juvenile	170.12