Detail information of GWHGAAEX018667/evm.TU.scaffold_97.45
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|410866644|ref|YP_006981255.1| | 3.00E-63 | major facilitator family protein [Propionibacterium acidipropionici ATCC 4875] |
| KOG | KOG0254 | 1.00E-168 | Predicted transporter (major facilitator superfamily) |
| nr | gi|672167712|ref|XP_008803828.1| | 0 | PREDICTED: hexose carrier protein HEX6-like [Phoenix dactylifera] |
| Swissprot | tr|Q07423|HEX6_RICCO | 0 | Hexose carrier protein HEX6 |
| trEMBL | tr|K4A8L3|K4A8L3_SETIT | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si035219m} |
| TAIR | AT5G61520 | 1.00E-168 | Major facilitator superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000102 | 1350266 | 1353879 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018667
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00083.23 | Sugar_tr | 37 | 498 | 3.50E-109 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
| GO:0016021 | Cellular Component | integral component of membrane |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.880 |
| SRR2545915 | Juvenile tuber | 3.220 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.080 |
| SRR5643514 | five period of Gastrodia elata | 25.380 | |
| SRR5643515 | five period of Gastrodia elata | 11.870 | |
| SRR5643524 | five period of Gastrodia elata | 21.540 | |
| SRR5643525 | five period of Gastrodia elata | 6.060 | |
| SRR5643528 | five period of Gastrodia elata | 5.470 | |
| SRR5643658 | five period of Gastrodia elata | 5.150 | |
| SRR5643659 | five period of Gastrodia elata | 10.460 | |
| SRR5643660 | five period of Gastrodia elata | 11.650 | |
| SRR5643661 | five period of Gastrodia elata | 9.950 | |
| SRR5643662 | five period of Gastrodia elata | 10.690 | |
| SRR5643663 | five period of Gastrodia elata | 9.970 | |
| SRR5643664 | five period of Gastrodia elata | 12.310 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.690 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.030 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.990 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.570 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.070 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 3.980 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.070 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.590 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 27.880 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.970 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 13.620 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 13.620 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.35 |
| Juven | Juvenile tuber | 57.33 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.95 | |
| Mother_Juven | Mother tuber of Juvenile | 17.42 |