Detail information of GWHGAAEX018669/evm.TU.scaffold_97.47
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|162146433|ref|YP_001600892.1| | 4.00E-28 | galactose-proton symporter [Gluconacetobacter diazotrophicus PAl 5] |
| KOG | KOG0254 | 1.00E-81 | Predicted transporter (major facilitator superfamily) |
| nr | gi|695002514|ref|XP_009380511.1| | 1.19E-106 | PREDICTED: uncharacterized protein LOC103968887 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q07423|HEX6_RICCO | 2.00E-87 | Hexose carrier protein HEX6 |
| trEMBL | tr|V4S3F4|V4S3F4_9ROSI | 2.00E-101 | Uncharacterized protein {ECO:0000313|EMBL:ESR34832.1} |
| TAIR | AT5G61520 | 1.00E-81 | Major facilitator superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000102 | 1372039 | 1386620 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018669
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00300.21 | His_Phos_1 | 26 | 107 | 2.60E-08 |
| PF00083.23 | Sugar_tr | 281 | 505 | 5.10E-52 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
| GO:0016021 | Cellular Component | integral component of membrane |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 6.320 |
| SRR2545915 | Juvenile tuber | 7.010 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 22.500 |
| SRR5643514 | five period of Gastrodia elata | 31.510 | |
| SRR5643515 | five period of Gastrodia elata | 22.630 | |
| SRR5643524 | five period of Gastrodia elata | 31.370 | |
| SRR5643525 | five period of Gastrodia elata | 13.420 | |
| SRR5643528 | five period of Gastrodia elata | 18.680 | |
| SRR5643658 | five period of Gastrodia elata | 13.220 | |
| SRR5643659 | five period of Gastrodia elata | 12.150 | |
| SRR5643660 | five period of Gastrodia elata | 11.870 | |
| SRR5643661 | five period of Gastrodia elata | 14.350 | |
| SRR5643662 | five period of Gastrodia elata | 11.380 | |
| SRR5643663 | five period of Gastrodia elata | 11.270 | |
| SRR5643664 | five period of Gastrodia elata | 12.530 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 22.150 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 25.590 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 25.810 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 17.950 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 24.050 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 22.800 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 17.240 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 19.980 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 29.310 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 24.500 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 36.800 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 36.800 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.82 |
| Juven | Juvenile tuber | 16.08 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 17.85 | |
| Mother_Juven | Mother tuber of Juvenile | 20.98 |