Gene detail

Detail information of GWHGAAEX018679/evm.TU.scaffold_97.63

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2149	4.00E-174	Uncharacterized conserved protein
nr	gi\|743807116\|ref\|XP_010927983.1\|	0	PREDICTED: testis-expressed sequence 10 protein [Elaeis guineensis]
trEMBL	tr\|A0A067FWT0\|A0A067FWT0_CITSI	0	Uncharacterized protein {ECO:0000313\|EMBL:KDO70605.1}
TAIR	AT5G06350	4.00E-174	ARM repeat superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000102	1766156	1769337	+

Transcript Sequence
>GWHTAAEX018679 AGACATCGCCTCCTTACCGAAAAGTCCGCTGTGAAACCTAAGTTTGAAAGATCTCTTGGAGCAGTGCTGATTCTCGCTAAGCTTTTAGTGCTTCTCCGTTCTCCTCTTCTTCACGGCAAAGACGAAGCCGACTGGCTCTCTTGAACGTCTTGACGCTCGATCCCTCTCTTGAACATCTTGACGCCATTTCTCAAGGTAGCCGCTTTTGTCCAGTAGCCTAGTAGATCCATGGGAAAGACGAAGCCGACTGCCTCTAAGAAGCCTAAGCGGGTTTTGGATTTCAAAAAAATAAAGCGCAAAATCGGGAGGAAATTGCCTCCACCGAAAAACTTTACCAACACGAGCATAAAATCCAAAGTCATTGTTCTTCCGGAGCAGAGCGTAGCTACTGAGAAAGCAGGTTTGGTAGTCAACAAGAAGGGTTTAACTCTGAGGGAGCTTCTTCAGCAAACATCGCATCACAATGGGAAGATACGGAGAGCTGCGTTGCTAGGCATTAGAGATTTGGTGTCTAAACATCCATCAGAGCTCAAACTTCACAAGCTTGCCTTGATCGAGAAGTTGAGAGAACGGATTTGTGACAGTGACAAAGTTGTTCGTGAAACATTGTATCAACTCTTAAAGACGGCTATCTTCCCTTCTCTCAAAGCGGACATAATTTCTTTGTTAATGGCTTATGTGTTCAATGCAATGACACACATTGTAGTTGATATCCGGATAATGGCTTTTAAATTCTTAGAACTCGTTGTTCTCAACTATCCCTCTTCTTTTACCAAACACACTGATCTGGTTCTTGACAATTATACTGATATTCTTAGAAATTATCAAATCTATCTACTGGAAAAGAGCCACCTCAAGAATGTTCTTGGTGGATTAGTCCATTGCCTTTCCCTGTTGGTTAAAAAGAGCGGGGAAGAATATTTTAATGAACCAGATGTCGATCAGAGAAGGTGCTTATTCAGTTATGCAAGTGAATCACCAAGAGTTGGTGAAGAGTTTTTTTCGGCAGCCAAGAAGCTTGGAGACCTTGTGCCAGTATTAGTCGGTTGCTTCCATGAATCTTATTTTCCGGTCTGGTCATTGTCTTCAATTGATGCTGAGTCTTTTGATTGTTTGCTTCTTACAGTTCGGTGTATAAATTTATCAGTTTCAATCATTGTGGAAAAGATTAATAAGTTTAATGCAATGCCTGATGGTGGTCCTTATGACACACTTGTTTTTCTCAAAACTTTACTAGAAACATTTCCACTTGGCCAATTGCATCATTCTACTGCAAAGGATGATGAGAGATACTTTATCTTGAATGCTAAGATTGCTGAGACTTTTTTGCACTTATTACCATGGATCAATGAAAGCTCATTTCCAATCGAGAAACTTTTAGGATTCATTGAAAGTTCTCTTCTTGGGGAGGTTAGTTGCAGTTCTTCCTCTACTAAGGCATTACTCAAAAAGAATTTATGCCTACTTTTGCCATTTATTCCAAGACTGATCTCTCAAGCTACGGCCAATTGGAGGATTCCGCTTTTAAAGGCATTTACTGTTGCATTTAGAGATTGCAAAGTGGATCCTCAGATTTGTATGTCTTATTTAGGTTCTATCGAAGCTATGCTGCTTCCTGCTACAAGTGGTGGTATTTCATTATGCAATCATCCAGAAATGTTTGACTTCCAAGTTGATTGGCTTCACGAGCTTCCCAAGATTCTTTGCTGCATTGGTGACAAGCGCGCCGATATTTCAAAGGCAATTTTGAAGTTACTTGTGTCTATTGGGAAGTCTTTTGCCCCAAACTCATCTCTTACTTTGGAGTATGATCACTTGCAATGCAATTTTATAGGCTTTTACAGCAGGAATATTGATGATGCAATAATTTATGGACCTTTTATAAACCTTCCTGTTGAGTGCCAAGAGCTTGCTATTGGGTTCCTCTATTATTTTTCAAGCATAGGCATTGATTTGCTTAATGCTTTGGCCTTTTGCTGCTTAAATCCTGCTCTAGATGTATTTTTAGTGGTTCGTATTGTAGAGATACTTTATTCAGCATACAAAGCTGGACATGTTCTTATCTCCCATATGATTGGGTTCTTATTCACACTAGTAGCTCGCTTTAAAGTTTATCCCAATAAATTTGGCATAGAGTGCGGTGATGGGAGTATATCAAAAAGAAGGGCTTTCAAGCTTCTTACTGGTTGTGTCTCTTCTTGCCTTTCTTCGATGGGCGACAATTCTTTGGTTTGGAGGCTGTTGCAGAAGAACATTTCTAATGAAATTTCACAGACTCCATCTTTAGACAACACACATGGTTTGTTGAAAATTATCATCAGTCTCGATGTAGAACACTCCTTACTTTCATGTGAGAGTTCCATTACTATCATAAGCAAATGGCTTTTTCAATACATTACCAGTGTTACTTCTTATATTCCAAACAATCAAGTTGAGGTTGACGTTCTATCTGATCAATTCAGAATTTTTAAATACTATGTCTGGCCTTGCATTATATTGTTCCATAGAAATGGCAAATTACTGCTGCATGTTTTGGAGCTATATGCCTCGGCATTAATGGAGGACAAGATCTTAGTTCAGTCACCATTGTGTTTTCTTGAGCTTCTTACCAAGATTCATGCAGTATCATCTATTCTTTTTTTAATGCTTAATGAAAAGAGATGCTATGGATGCCTTTCTCTATGCAAGGATGCTATCAAAAAGGCAATGCATAATGTAAGGATACTACAGGATACAACTTTAATTAGCATGACTCATGAGGAGAAGCACAAGTTACAGCTGATCTGTGATAGATTGGATGTAAAATTTTTGCAAGCTATGTTTGAATGAGGCTGGTAATGCAGAACTTTGTGAAATCAAATGTTACAATGCGGCAAGTATTGGAAACTTATTGGAGAGAGGCATGTTTATATGTCATTGAATTTCTTGTTTATGATTGCATCAAAATATACTAAGAACCCTTTGTGAGAATAGCTTGGCTTTTATATTAAATGTTCTAGTAGTGATGCTGTGTGTACACATTGCATTCTTTTCATCGAAAACTTTTTTTTTTTTGTTAAAATACTCTTTTTGAGTCTTTACAACTGTTGAATTTAGCTCAACGCTGTGAGTGTGTTGGCATTGTAGATAACATCTTGTGTTTCTTTCCTTGAAACCTCTCCTCGGGTTATATCGCCAAAAAT

Network for GWHGAAEX018679

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12333.7	Ipi1_N	143	200	5.20E-07

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.540
SRP064423	SRR2545915	Juvenile tuber	8.670
SRP108465	SRR5643513	five period of Gastrodia elata	6.770
	SRR5643514	five period of Gastrodia elata	7.840
	SRR5643515	five period of Gastrodia elata	6.600
	SRR5643524	five period of Gastrodia elata	7.130
	SRR5643525	five period of Gastrodia elata	6.850
	SRR5643528	five period of Gastrodia elata	6.960
	SRR5643658	five period of Gastrodia elata	8.130
	SRR5643659	five period of Gastrodia elata	6.710
	SRR5643660	five period of Gastrodia elata	8.570
	SRR5643661	five period of Gastrodia elata	5.370
	SRR5643662	five period of Gastrodia elata	4.890
	SRR5643663	five period of Gastrodia elata	6.790
	SRR5643664	five period of Gastrodia elata	4.850
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.040
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.810
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.790
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.120
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.610
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.380
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.580
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.340
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.430
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.160
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.880
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.880
SRP279888	Gastro	Gastrodia elata tuber	7.78
	Juven	Juvenile tuber	9.66
	Mother_Gastro	Mother tuber of Gastrodia elata	4.58
	Mother_Juven	Mother tuber of Juvenile	5.69