Detail information of GWHGAAEX018682/evm.TU.scaffold_97.68


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|146298365|ref|YP_001192956.1|2.00E-18two component regulator [Flavobacterium johnsoniae UW101]
nrgi|222636426|gb|EEE66558.1|3.42E-98hypothetical protein OsJ_23077 [Oryza sativa Japonica Group]
Swissprottr|C0LGQ9|Y4294_ARATH8.00E-55Probable LRR receptor-like serine/threonine-protein kinase At4g20940
trEMBLtr|B9FVH1|B9FVH1_ORYSJ1.00E-98Putative uncharacterized protein {ECO:0000313|EMBL:EEE66558.1}
trEMBLtr|B9FVH1|B9FVH1_ORYSJ1.00E-09Putative uncharacterized protein {ECO:0000313|EMBL:EEE66558.1}
trEMBLtr|B9FVH1|B9FVH1_ORYSJ5.00E-08Putative uncharacterized protein {ECO:0000313|EMBL:EEE66558.1}
TAIRAT4G209402.00E-54Leucine-rich receptor-like protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010219173151924059+
Transcript Sequence

Network for GWHGAAEX018682

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13855.5LRR_8441028.60E-09
PF13516.5LRR_61151300.64
PF13516.5LRR_61942071.4
PF13516.5LRR_62442551
PF12854.6PPR_12743053.80E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.800
SRR2545915Juvenile tuber13.970
SRP108465SRR5643513five period of Gastrodia elata7.980
SRR5643514five period of Gastrodia elata6.260
SRR5643515five period of Gastrodia elata5.910
SRR5643524five period of Gastrodia elata4.980
SRR5643525five period of Gastrodia elata5.990
SRR5643528five period of Gastrodia elata4.160
SRR5643658five period of Gastrodia elata5.520
SRR5643659five period of Gastrodia elata15.070
SRR5643660five period of Gastrodia elata15.550
SRR5643661five period of Gastrodia elata11.500
SRR5643662five period of Gastrodia elata14.920
SRR5643663five period of Gastrodia elata16.540
SRR5643664five period of Gastrodia elata17.520
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.080
SRR6049655Rhizomagastrodiae_C368-T10_good_15.890
SRR6049656Rhizomagastrodiae_C368-T07_good_16.080
SRR6049657Rhizomagastrodiae_C368-T07_good_18.520
SRR6049658Rhizomagastrodiae_C368-T04_good_11.770
SRR6049659Rhizomagastrodiae_C368-T04_good_12.800
SRR6049660Rhizomagastrodiae_C368-T01_good_13.900
SRR6049661Rhizomagastrodiae_C368-T04_good_12.130
SRR6049662Rhizomagastrodiae_C368-T01_good_16.000
SRR6049663Rhizomagastrodiae_C368-T01_good_12.410
SRR6049664Rhizomagastrodiae_C368-T10_good_15.640
SRR6049665Rhizomagastrodiae_C368-T10_good_15.640
SRP279888GastroGastrodia elata tuber 6.44
JuvenJuvenile tuber15.61
Mother_GastroMother tuber of Gastrodia elata 2.57
Mother_JuvenMother tuber of Juvenile 6.36