Detail information of GWHGAAEX018691/evm.TU.scaffold_97.81


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427722055|ref|YP_007069332.1|2.00E-06WD40 repeat-containing protein [Leptolyngbya sp. PCC 7376]
KOGKOG10643.00E-161RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily
nrgi|743755603|ref|XP_010912358.1|0PREDICTED: uncharacterized protein LOC105038292 [Elaeis guineensis]
trEMBLtr|M0TKC3|M0TKC3_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P24370_001}
TAIRAT2G465603.00E-161transducin family protein / WD-40 repeat family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010223627612405085+
Transcript Sequence

Network for GWHGAAEX018691

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.31WD405826140.00098
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.020
SRR2545915Juvenile tuber30.740
SRP108465SRR5643513five period of Gastrodia elata13.480
SRR5643514five period of Gastrodia elata13.850
SRR5643515five period of Gastrodia elata15.030
SRR5643524five period of Gastrodia elata15.810
SRR5643525five period of Gastrodia elata17.870
SRR5643528five period of Gastrodia elata13.080
SRR5643658five period of Gastrodia elata13.920
SRR5643659five period of Gastrodia elata13.450
SRR5643660five period of Gastrodia elata12.730
SRR5643661five period of Gastrodia elata11.100
SRR5643662five period of Gastrodia elata9.870
SRR5643663five period of Gastrodia elata13.080
SRR5643664five period of Gastrodia elata11.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.010
SRR6049655Rhizomagastrodiae_C368-T10_good_112.190
SRR6049656Rhizomagastrodiae_C368-T07_good_114.550
SRR6049657Rhizomagastrodiae_C368-T07_good_121.130
SRR6049658Rhizomagastrodiae_C368-T04_good_119.620
SRR6049659Rhizomagastrodiae_C368-T04_good_125.320
SRR6049660Rhizomagastrodiae_C368-T01_good_117.570
SRR6049661Rhizomagastrodiae_C368-T04_good_122.720
SRR6049662Rhizomagastrodiae_C368-T01_good_113.170
SRR6049663Rhizomagastrodiae_C368-T01_good_117.620
SRR6049664Rhizomagastrodiae_C368-T10_good_114.690
SRR6049665Rhizomagastrodiae_C368-T10_good_114.690
SRP279888GastroGastrodia elata tuber 15.06
JuvenJuvenile tuber18.21
Mother_GastroMother tuber of Gastrodia elata 17.88
Mother_JuvenMother tuber of Juvenile 23.31