Gene detail

Detail information of GWHGAAEX018699/CADD01482.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4658	6.00E-40	Apoptotic ATPase
nr	gi\|301154105\|emb\|CBW30194.1\|	3.36E-68	Putative disease resistance protein [Musa balbisiana]
Swissprot	tr\|Q38834\|R13L4_ARATH	2.00E-40	Disease resistance RPP13-like protein 4
trEMBL	tr\|E1UHI3\|E1UHI3_MUSBA	1.00E-68	Putative disease resistance protein {ECO:0000313\|EMBL:CBW30194.1}
TAIR	AT3G50950	6.00E-40	HOPZ-ACTIVATED RESISTANCE 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000102	2645261	2648735	-

Transcript Sequence
>GWHTAAEX018699 TCTGTCTATAAAACTTTGCGCAATAAGTTCGTTCTTGTACAGTAGTAAGAAAATCGAAAGGTATCGACCAGGCGATCGATCGAGATGGCGGCAGTGGCAGATTTCCTGGTCTCGAACCTCTGCGATGCATTGCTCAAGATTGCAAAGGATGAGTTAGGGAGGCAGATGGGATTGCGGAACGACGTGGAAACTCTTCGAAGAACCCTGGAGATGCTCAAACGCTACCTTCAAGACGCTGAGAACAGGAGCATCGGGGATGCTTCCGTTAATCTCTGGCTGAATCAAATCAAGGACGTCATGTACGACATTGATGATGTTCTCGCTGAGTACAACCTGAAACTGCTCGATGTTCATAGAAAGCAGGTATGCCCTTGTCTTCCTCTCCCGTCGTCCTGCTTCCAGAAGGCTCGATCCAAGCACAGGATTAGCGTTCAGATCCAGGAGCTGAACCGAAAGATCAAGGATGAAATATTTAGCCAAATACCCATCTTAAAGCTCATTACAAACATTCCTCGAAGCTCCTCCTCTGCCCTTGATCCCATGTCCGATCGCAAGACGCATTATGCGCTGGTCCGTTCCGATATAGTCGGCAGTAGAATACACGAGGATGCCAGGCGCTTGATCGAATCATTATTAGCCGTACAGGAGACGGATCAGGACCAGCTTCTTGTGTATGTCATTGTTGGAATCGGAGGGATTGGCAAAACCACTCTGGCTAAATTAGTGTTTGATGATAACATAATCAAAAGCTGCTTTGAAGAAAAGGTGTGGGTGCCTGTAACCCAGAATTACAGCAAGGCTGATATCTTGACAAGCATCCTCGAATCTTCTGAAACCGGTGGGCATCAAGAAAAGGATGTAAGTTCTATGGTGCAAGGAAAAAGGTTATTTATGGTGCTCGATGATGTATGGGAATCTAATAGGATATCGAACGAGTGGTTGAGAACCTTGCTGCTGGGCAGCACGGCAAGGGGCAGCAGGGTTCTCGTCACCACAAGAGACATGGCAGTGGCAAAACAGATGATGGCATTTTACTCCCATCAAATGCGGCCATTGCTTCCAGACGATGGATGGCTGCTGCTCTGCAAGTCGGCGTTTCTCCCCTGGGAGCAGAAAGAAGCAATAAATGATAAATGGAACCTCAAAGATGTAGGCATGGAATTTATTAAAAAATGTGATTGTCTGCCATTGGCAATTAGTGCCATTGGAGGGATCTTGTTAGGAAAAACAAAACAAGAGAAGCATGGGAGATTGTTCTGAAGAACAGCTTGTGGAAGGTAAGCCGACTCCCTCCTCAGATCCACGCAGCCTTGTACATGAGCTACCAGTATCTGCCTGCAAATATCAAGCAATGCTTCCTGTATTACTCCTTATATCCTGTTAACGCGTATCTCCATAAATCAATTGTTTTGGAATACTGGATACAAGAAGGCTTCATTAAAGAAGAAACCAATTTTACAGCTTATGAAGTTGGAGAAAGGCATTTAAGACTTTTGATGCAGAGGAACCTTCTTATGCCTCGTCCACATTACATTGGAGATTTCTCTTTCAAAATGCACGACCTCTATCGCTCTTTGTCTCTCTTTCTGATGCAAAATGATACTCTAGTCTTAAATGATAACGAAATACTAAGGAGGGATTCAAGTGAAGGGCAAATGAAGCTGCGGCGCCTTTCATTAACCCAGGGTTGTGGTAAAATGATGACAAATACAACATCAACAACCAACTCCCTCCCCAAAAGTATAGAAGAGCAAGTGAAGTTGAGGACTTTTTTGGTCTTTGATGAACTCATTGATAAACTTGATGATAATCTTTTCAATCAGCTTCATTTTCTAAGGGTACTGTCCCTCCATAGAACTAGTGTTACAGAATTGCCTGTAACCATAAGCTTTCTCACACATCTTAAAATCCTAAATATATCTTACACGCCAATAAAGAAGCTGCCACAAACCATAGAAAATCTTAAATCTTTGAAAACTCTTGTGGCTACTGGCTGTGAAAGTCAGACCGCTCTGCCTCCATGTATTATGAAGCTGCATCAGCTATGCTTTCTTTCAATTTATCTTAGTGCATTGGACTGTCTGCCACCAGGGCTGTTAGGGTTAAACAAGCTACAATATCTGGACTTCGTTGTACCACCAGAAGATGCTGCATACGAATCATCAACTATTAATGAACTAGAGGGACTCGTGCAACTCAGGCATTTGACTTTGACCAAATTAGAAAGGGTGTCTGATAAATTGCAAGCAAAATGTGCCGCACTAAGAGAGAAAAAGTGTTTGAAATTTCTTCATTTGGAATGCTCAGAAAGTGATTCTTCCAGCATTGAAGTCGCCAACAGAGTTAAGGAGATTTTTGAAGAGCTTTGCCCTCCTCCCCAACTACAAGAACTTAGAATTTACAGTTATTGTGGGCAGAAGCTCCCGAGTTGGCTAGGACGCGCGCCATCGACCCATCTTCTTCGCCAGCTAGTAAATTTGATAATTCATAGCTGCAGCAATTGTAAACGGCTCGACGGTCTTGGATTGTTAAGTAATTGGAAATACTCGACATTAAACGTGCTCATTCAATAAAAAGTATCGGACCAGAGTTTTACTCAAACAGTAATAAAAGTAACATAGCTGAAGAGGGTGCCATGAAGCCATCATCATATAATGAAACTGGTTTTTTGCCAAAAATGAGGTACTTGAACATTGAGAGCATGGATAGCTGGGAGGAGTGGAGCTGTTTGGGGATGAAAATACCAGTGATGCCTCATTTGGAGATCCTGCAAATAGATGAATGCAGCAAGCTCAAGTCATTTCCCGAAGAACTCCTGCATCACGTAGCTAAATCTTTGAAGAGAATATTTATCCAGAGGGCTTGCAACCTAGGACTCAAAGTGGTGCAGAGCCTTCCCATTTTAGAAGTGCTCAATATCGAACACGCCCCCTATTTGGAGAGGATATCGGGACTCCCGGCTCTTCAAGAATTAATCCTTGTTGACTGCCAGCGACTCATGCTTGTGGAGCTTCAGCATCCGCTGCTGATGATCGAATGGACTAATTTTAGAGCAAACTCGCTTCCTGCGTGAATTTTCAACAGTAATGACAATGCCGGGGATGATTGTGGCTTAAAAGCCACTCTTCTCGTAATAATATGCAACATGTCTTTAGCACATATGATAAAGGATGGGGCTTCTCAACGGATGATTGACAGTAAACGCTTTGAAAACTTTGATGTTTACGACAATTACAATCAATTAAGGGTTTCTTACACTGAAACTCCCTATAAATTCGAAACTTATTTTGATAGTGAAAAGGATAGTGAAGCCATGGAGCTGCTAACGGATGATGATTGACAGCATAAGCTTTGATAATTTATTAACGCTTGAGAGAGCTATCACAATGC

Network for GWHGAAEX018699

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00931.21	NB-ARC	216	413	2.70E-39

Protein Sequence

>GWHPAAEX018699
SVYKTLRNKFVLVQENRKVSTRRSIEMAAVADFLVSNLCDALLKIAKDELGRQMGLRNDVETLRRTLEMLKRYLQDAENRSIGDASVNLWLNQIKDVMYDIDDVLAEYNLKLLDVHRKQVCPCLPLPSSCFQKARSKHRISVQIQELNRKIKDEIFSQIPILKLITNIPRSSSSALDPMSDRKTHYALVRSDIVGSRIHEDARRLIESLLAVQETDQDQLLVYVIVGIGGIGKTTLAKLVFDDNIIKSCFEEKVWVPVTQNYSKADILTSILESSETGGHQEKDVSSMVQGKRLFMVLDDVWESNRISNEWLRTLLLGSTARGSRVLVTTRDMAVAKQMMAFYSHQMRPLLPDDGWLLLCKSAFLPWEQKEAINDKWNLKDVGMEFIKKCDCLPLAISAIGGILLGKTKQEKHGRLFRTACGRADSLLRSTQPCTATSICLQISSNASCITPYILLTRISINQLFWNTGYKKASLKKKPILQLMKLEKGIDFCRGTFLCLVHITLEISLSKCTTSIALCLSFCKMILSMITKYGGIQVKGKSCGAFHPRVVVKQIQHQQPTPSPKVKSKSGLFWSLMNSLINLMIIFSISFIFGYCPSIELVLQNCLPAFSHILKSIYLTRQRSCHKPKILNLKLLWLLAVKVRPLCLHVLSCISYAFFQFILVHWTVCHQGCGTSYNIWTSLYHQKMLHTNHQLLMNRDSCNSGILPNKGCLINCKQNVPHERKSVNFFIWNAQKVILPALKSPTELRRFLKSFALLPNYKNLEFTVIVGRSSRVGDARHRPIFFASIFIAAAIVNGSTVLDCVIGNTRHTCSFNKKYRTRVLLKQKHSRGCHEAIIINWFFAKNEVLEHEHGLGGVELFGDENTSDASFGDPANRMQQAQVISRRTPASRSIFEENIYPEGLQPRTQSGAEPSHFRSAQYRTRPLFGEDIGTPGSSRINPCLPATHACGASASAADDRMDFSKLASCVNFQQQCRGLWLKSHSSRNNMQHVFSTYDKGWGFSTDDQTLKLCLRQLQSIKGFLHNSLIRNLFKGSHGAANGLTAALIIYRLRELSQC

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0043531	Molecular Function	ADP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.430
SRP064423	SRR2545915	Juvenile tuber	3.150
SRP108465	SRR5643513	five period of Gastrodia elata	0.130
	SRR5643514	five period of Gastrodia elata	0.260
	SRR5643515	five period of Gastrodia elata	0.210
	SRR5643524	five period of Gastrodia elata	0.200
	SRR5643525	five period of Gastrodia elata	0.420
	SRR5643528	five period of Gastrodia elata	0.470
	SRR5643658	five period of Gastrodia elata	0.250
	SRR5643659	five period of Gastrodia elata	0.450
	SRR5643660	five period of Gastrodia elata	0.610
	SRR5643661	five period of Gastrodia elata	0.560
	SRR5643662	five period of Gastrodia elata	0.390
	SRR5643663	five period of Gastrodia elata	0.440
	SRR5643664	five period of Gastrodia elata	0.530
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.070
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.700
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.910
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.430
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.090
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.500
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.800
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.190
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.360
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.990
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.990
SRP279888	Gastro	Gastrodia elata tuber	0.99
	Juven	Juvenile tuber	0.32
	Mother_Gastro	Mother tuber of Gastrodia elata	1.06
	Mother_Juven	Mother tuber of Juvenile	0.20