Detail information of GWHGAAEX018701/evm.TU.scaffold_97.97


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374312880|ref|YP_005059310.1|1.00E-32major facilitator superfamily protein [Granulicella mallensis MP5ACTX8]
KOGKOG25330Permease of the major facilitator superfamily
nrgi|695047368|ref|XP_009411561.1|0PREDICTED: putative glycerol-3-phosphate transporter 1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9C5L3|GLPT1_ARATH0Putative glycerol-3-phosphate transporter 1
trEMBLtr|I1J0F5|I1J0F5_BRADI0Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI5G17940.1}
TAIRAT3G474200phosphate starvation-induced gene 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010226884042693107+
Transcript Sequence

Network for GWHGAAEX018701

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07690.15MFS_1822931.20E-28
PF07690.15MFS_13064595.40E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0022857Molecular Functiontransmembrane transporter activity
GO:0016021Cellular Componentintegral component of membrane
GO:0005887Cellular Componentintegral component of plasma membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.360
SRR2545915Juvenile tuber2.130
SRP108465SRR5643513five period of Gastrodia elata12.820
SRR5643514five period of Gastrodia elata22.450
SRR5643515five period of Gastrodia elata22.040
SRR5643524five period of Gastrodia elata17.810
SRR5643525five period of Gastrodia elata116.280
SRR5643528five period of Gastrodia elata55.150
SRR5643658five period of Gastrodia elata54.280
SRR5643659five period of Gastrodia elata20.250
SRR5643660five period of Gastrodia elata13.630
SRR5643661five period of Gastrodia elata15.330
SRR5643662five period of Gastrodia elata29.600
SRR5643663five period of Gastrodia elata17.080
SRR5643664five period of Gastrodia elata12.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.510
SRR6049655Rhizomagastrodiae_C368-T10_good_121.560
SRR6049656Rhizomagastrodiae_C368-T07_good_120.260
SRR6049657Rhizomagastrodiae_C368-T07_good_110.680
SRR6049658Rhizomagastrodiae_C368-T04_good_113.780
SRR6049659Rhizomagastrodiae_C368-T04_good_114.830
SRR6049660Rhizomagastrodiae_C368-T01_good_118.430
SRR6049661Rhizomagastrodiae_C368-T04_good_113.710
SRR6049662Rhizomagastrodiae_C368-T01_good_128.450
SRR6049663Rhizomagastrodiae_C368-T01_good_115.140
SRR6049664Rhizomagastrodiae_C368-T10_good_137.810
SRR6049665Rhizomagastrodiae_C368-T10_good_137.810
SRP279888GastroGastrodia elata tuber 5.25
JuvenJuvenile tuber63.97
Mother_GastroMother tuber of Gastrodia elata 38.05
Mother_JuvenMother tuber of Juvenile 24.39