Detail information of GWHGAAEX018720/evm.TU.scaffold_97.125


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262198376|ref|YP_003269585.1|1.00E-59trehalose-phosphatase [Haliangium ochraceum DSM 14365]
KOGKOG10501.00E-132Trehalose-6-phosphate synthase component TPS1 and related subunits
nrgi|255539761|ref|XP_002510945.1|3.42E-148trehalose-6-phosphate synthase, putative [Ricinus communis]
Swissprottr|O64896|TPPA_ARATH3.00E-133Trehalose-phosphate phosphatase A
trEMBLtr|B9R9S0|B9R9S0_RICCO1.00E-148Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}
TAIRAT5G514601.00E-132Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010231857173268239+
Transcript Sequence

Network for GWHGAAEX018720

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02358.15Trehalose_PPase853231.90E-67
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01087otsB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005992Biological Processtrehalose biosynthetic process
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.160
SRR2545915Juvenile tuber7.470
SRP108465SRR5643513five period of Gastrodia elata2.670
SRR5643514five period of Gastrodia elata0.240
SRR5643515five period of Gastrodia elata2.010
SRR5643524five period of Gastrodia elata1.420
SRR5643525five period of Gastrodia elata0.120
SRR5643528five period of Gastrodia elata0.060
SRR5643658five period of Gastrodia elata0.050
SRR5643659five period of Gastrodia elata0.520
SRR5643660five period of Gastrodia elata0.340
SRR5643661five period of Gastrodia elata0.120
SRR5643662five period of Gastrodia elata0.340
SRR5643663five period of Gastrodia elata0.040
SRR5643664five period of Gastrodia elata0.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.210
SRR6049655Rhizomagastrodiae_C368-T10_good_10.380
SRR6049656Rhizomagastrodiae_C368-T07_good_12.100
SRR6049657Rhizomagastrodiae_C368-T07_good_11.500
SRR6049658Rhizomagastrodiae_C368-T04_good_11.230
SRR6049659Rhizomagastrodiae_C368-T04_good_10.700
SRR6049660Rhizomagastrodiae_C368-T01_good_10.140
SRR6049661Rhizomagastrodiae_C368-T04_good_11.670
SRR6049662Rhizomagastrodiae_C368-T01_good_10.090
SRR6049663Rhizomagastrodiae_C368-T01_good_10.210
SRR6049664Rhizomagastrodiae_C368-T10_good_10.180
SRR6049665Rhizomagastrodiae_C368-T10_good_10.180
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.04
Mother_GastroMother tuber of Gastrodia elata 0.33
Mother_JuvenMother tuber of Juvenile 0.09