Gene detail

Detail information of GWHGAAEX018730/evm.TU.scaffold_97.132

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|220925996\|ref\|YP_002501298.1\|	1.00E-19	peptidase C14 caspase catalytic subunit p20 [Methylobacterium nodulans ORS 2060]
KOG	KOG0548	0	Molecular co-chaperone STI1
nr	gi\|672145837\|ref\|XP_008796849.1\|	0	PREDICTED: hsp70-Hsp90 organizing protein 3 [Phoenix dactylifera]
Swissprot	tr\|Q9STH1\|HSOP3_ARATH	0	Hsp70-Hsp90 organizing protein 3
trEMBL	tr\|W9R4M6\|W9R4M6_9ROSA	0	Heat shock protein STI {ECO:0000313\|EMBL:EXB54445.1}
TAIR	AT4G12400	0	stress-inducible protein, putative

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000102	3477135	3493241	+

Transcript Sequence
>GWHTAAEX018730 GTTTACCTGTAGAGTTAATGTTTATATAAGTTATTGCAATCCTGTAGTAATACCAGCCTAAGATGCCAACTTAGGGTTGCTCAAAGAACAAATGTTCAATTAATACATCTTAATAAATTTATCTGCTATACTTACACAGCTCGAAATAAAATAAATATATTTAAACTTAATATTGTACAGCGTCCGAAGAACATTCCAGAACAGCGTTGCGGCACTCCGGTCCGCGACGTTTAATCTAATTTTCTTCCTTGATTAACTAACCGAACCCCGATCGTACTACCGATCCTTTCTCCATCATGGCCGACGAGGCAAAAGCCAAGGGTAACGCCGCCTTCTCTTCCGCCCGCTTCGAAGAAGCGATTCGATATTTCGACGAAGCCATCGATCTCGCACCAACCAATCATCTGCTCTATTCCAACCGCTCTGCGGCCTACGCTTCCGTCCACCGCTACGCGGATGCTCTCACAGACGCCCGAAAGACCGTTGAGCTGAAGCCAGATTGGTCCAAGGGCTACGGCCGCCTTGGCGCCGCTCAGCTCGGAATCGGAAACCTTGAAGAGGCCATCGCAGCATATGAGAAGGGCCTCGAGTTGGATTCCGGAAATGAGGCGCTTAAATCTGGGCTAGAGGATGCCCGAGCTGCTGCATCGCGTGCGCGCTCGCCTCAGCTAGGAACGTCCCCATTCGGAAAGATTTTCCAGGGACCGGAGGTGTGGGTAAAGCTGACCTCGGATCCCACTACTAGGGTGTATCTCCAGCAACCGGATTTCGTTAAGATGCTGCAGGATGTGCAGAAGAATCCTGGTAGCATTAATTTGTATCTCCAAGACCAGAGGATGATGCAGGTGCTCGGAGTATTGCTTAATGTGAAAAGGAAAACACCAGGTGATGAGGTCAAGAGAGACGTGCCTGAGGTTGTGAAGAAAACATCGCAGGCTGATCCTGTGCAGAAGCCACCTGAGCAGCCACAGACAGAGCCAATGAAGTTCAAGAGAGAGAAAGAAACCAAGCATTCTGAGGCTATGAACGAGAAGGAAGCTGGCAATGAGGCTTATAAAAAGAAGGATTTCGACAAGGCAATTCACCATTATACTCGAGCCATGGAACTTGATGATGAGGACATTTCTTTCATTACCAACAGAGCTGCTGTCTATTTTGAGACAGGAAAGTACGAAGACTGTATAGCTGATTGTGACAAAGCTATTGAGAGGGGTCGTGAACTTCACTCTGATTTCAAGATGATTGCAAGAGCATTAACCAGGAAAGGATCCGCACTTGTCAAAATGGCCAAGTCTTCAATGGATTATGATGCTGCAATTGAAACTTTTCAGAAGGCATTAACTGAACATCGCAACCCTGATACATTAAAAAAGCTGAATGATGCTGAGAAGGCTAAGAAAGAACTTGAGCAACAAGAATATTTTGATCCTAAAACAGCCGACGAGGAGCGAGAACGAGGCAATGAGTTTTTTAAAGAGCAAAAATACCCAGAAGCAGTGAAACATTATACTGTAGCAATCAGGAGGAACCCCCGTGATCCGAAGGCGTACAGCAATCGAGCAGCATGCTACACAAAGCTGGGGGCATTGCCTGAGGGGCTGAAGGATGCAGAGAAATGCATTGAATTGGATCCAACGTTCTCAAAGGGCTACATGCGGAAAGGTGCAGTTCAGTTCTTCATGAAGGAATACGATAAGGCAATGGAAACATATCAGCAAGGCCTGAAGCACGACCCTAACAATCGGGAGCTTGCTGATGGTGTTCAGAGGTGCATTGAGCAGATCAATAGGACAAACAGGGGTGATTTAAGTCCCGAAGAATTGAAAGAGAGACAGGCCAAGGCAATGCAGGATCCTGAGATACAGACAATCCTATCTGATCCCATAATGCATCAGGTGCTAATTGATTTGCAAGAAAATCCCAAGGCAGCGCAGGAGCACCTGAAGAATCTTCAAGTAATGAGCAAAATTCAGAAGCTCGTCAGTGCAGGGATTGTGCAGATGAGATGAGATGAGATGAGAGAGCGTGCATTTACTTGGTCGCATTCTCTTGAAATTGGCTTTCCTCTCTCTTAGATGTTTAAAAGTGAATGCTGTTAACGGTCCAAACTTCTGCTCTTTTGCTTTAAACATTTTCTTTTTAATTTTTTTTTTTTGGCTGGCGATTGTTCTTCAGGGAATGAATTTTTTTTTCTTGAAGAATTGGGGAATAGAACAATGGTGCTGAGAGGATGGCCATTATCCCAGCCCGGAGATAAACTGTTGAAGATATGAATATGCCTATATTATTGGAGGGAGAAGCATGATGCAAAAACAACAAGTGTTGCATCTCAACTATTTTAATATCGATATTAAGCTGATCAAAACATGGGAAAAGTTATATTGGACATATGGCATTTGATGGAAGGTGCAGGAACGCATGGAAGTTCTTGAGCTAATAGCAATGATATTATTCTTTTCTTGAACTTGGGTAAATTTATATATAAATTAAATATGGTTGGTGGGATTTGAATATAATTATTTTTGAGCTTGAACCATTGAGCTATAATGCTATAACCCTTTTATTGATGCTGAGGTTGCAGGATACTCATACAATGGTACTCTCCATTGTAATTTATTTTTGTGATAATTTTATATTCAACCAATTTTTTATTTTTTATATCCTTAATCTTAAGTTTTTAAGTACCATGAATCCTTATAGTTGTATCGAAATTATCACTCAACTTTGCCTTTTTTTAATTATTTTATGAGAACG

Network for GWHGAAEX018730

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13432.5	TPR_16	7	67	0.0052
PF13181.5	TPR_8	71	101	0.00044
PF13414.5	TPR_11	388	429	4.30E-08
PF00515.27	TPR_1	450	482	3.10E-07

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	15.300
SRP064423	SRR2545915	Juvenile tuber	19.010
SRP108465	SRR5643513	five period of Gastrodia elata	15.540
	SRR5643514	five period of Gastrodia elata	16.290
	SRR5643515	five period of Gastrodia elata	17.260
	SRR5643524	five period of Gastrodia elata	16.060
	SRR5643525	five period of Gastrodia elata	16.220
	SRR5643528	five period of Gastrodia elata	14.580
	SRR5643658	five period of Gastrodia elata	10.760
	SRR5643659	five period of Gastrodia elata	20.380
	SRR5643660	five period of Gastrodia elata	21.770
	SRR5643661	five period of Gastrodia elata	18.710
	SRR5643662	five period of Gastrodia elata	15.390
	SRR5643663	five period of Gastrodia elata	21.880
	SRR5643664	five period of Gastrodia elata	16.280
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.390
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.570
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.080
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.040
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.030
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.570
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.590
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.220
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.220
SRP279888	Gastro	Gastrodia elata tuber	10.71
	Juven	Juvenile tuber	30.39
	Mother_Gastro	Mother tuber of Gastrodia elata	23.99
	Mother_Juven	Mother tuber of Juvenile	33.83