Detail information of GWHGAAEX018756/evm.TU.scaffold_98.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695066333|ref|XP_009380055.1|5.53E-65PREDICTED: uncharacterized protein LOC103968529 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RJ46|M0RJ46_MUSAM2.00E-65Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P17710_001}
TAIRAT2G443108.00E-58Calcium-binding EF-hand family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009416187521620256-
Transcript Sequence

Network for GWHGAAEX018756

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_725981.20E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.110
SRR2545915Juvenile tuber28.790
SRP108465SRR5643513five period of Gastrodia elata157.220
SRR5643514five period of Gastrodia elata168.890
SRR5643515five period of Gastrodia elata158.370
SRR5643524five period of Gastrodia elata141.210
SRR5643525five period of Gastrodia elata197.430
SRR5643528five period of Gastrodia elata150.140
SRR5643658five period of Gastrodia elata157.690
SRR5643659five period of Gastrodia elata126.080
SRR5643660five period of Gastrodia elata135.150
SRR5643661five period of Gastrodia elata143.220
SRR5643662five period of Gastrodia elata202.640
SRR5643663five period of Gastrodia elata116.590
SRR5643664five period of Gastrodia elata216.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1119.970
SRR6049655Rhizomagastrodiae_C368-T10_good_1111.160
SRR6049656Rhizomagastrodiae_C368-T07_good_186.940
SRR6049657Rhizomagastrodiae_C368-T07_good_1158.770
SRR6049658Rhizomagastrodiae_C368-T04_good_188.470
SRR6049659Rhizomagastrodiae_C368-T04_good_1102.040
SRR6049660Rhizomagastrodiae_C368-T01_good_1105.720
SRR6049661Rhizomagastrodiae_C368-T04_good_184.600
SRR6049662Rhizomagastrodiae_C368-T01_good_161.080
SRR6049663Rhizomagastrodiae_C368-T01_good_163.510
SRR6049664Rhizomagastrodiae_C368-T10_good_170.230
SRR6049665Rhizomagastrodiae_C368-T10_good_170.230
SRP279888GastroGastrodia elata tuber 198.34
JuvenJuvenile tuber172.20
Mother_GastroMother tuber of Gastrodia elata 88.06
Mother_JuvenMother tuber of Juvenile 130.17