Detail information of GWHGAAEX018759/evm.TU.scaffold_98.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33129.00E-90Predicted membrane protein
nrgi|743850712|ref|XP_010939952.1|6.62E-99PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Elaeis guineensis]
trEMBLtr|D7TIB6|D7TIB6_VITVI1.00E-95Putative uncharacterized protein {ECO:0000313|EMBL:CBI29992.3}
TAIRAT5G066609.00E-90Protein of unknown function DUF106, transmembrane

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009417291471730528+
Transcript Sequence

Network for GWHGAAEX018759

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01956.15DUF106141841.80E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0032469Biological Processendoplasmic reticulum calcium ion homeostasis
GO:0005262Molecular Functioncalcium channel activity
GO:0016020Cellular Componentmembrane
GO:0030176Cellular Componentintegral component of endoplasmic reticulum membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.180
SRR2545915Juvenile tuber14.430
SRP108465SRR5643513five period of Gastrodia elata25.540
SRR5643514five period of Gastrodia elata26.490
SRR5643515five period of Gastrodia elata22.060
SRR5643524five period of Gastrodia elata23.310
SRR5643525five period of Gastrodia elata14.660
SRR5643528five period of Gastrodia elata13.900
SRR5643658five period of Gastrodia elata17.210
SRR5643659five period of Gastrodia elata24.140
SRR5643660five period of Gastrodia elata25.490
SRR5643661five period of Gastrodia elata25.510
SRR5643662five period of Gastrodia elata20.810
SRR5643663five period of Gastrodia elata16.540
SRR5643664five period of Gastrodia elata15.920
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.060
SRR6049655Rhizomagastrodiae_C368-T10_good_132.250
SRR6049656Rhizomagastrodiae_C368-T07_good_132.330
SRR6049657Rhizomagastrodiae_C368-T07_good_122.310
SRR6049658Rhizomagastrodiae_C368-T04_good_120.240
SRR6049659Rhizomagastrodiae_C368-T04_good_115.120
SRR6049660Rhizomagastrodiae_C368-T01_good_122.510
SRR6049661Rhizomagastrodiae_C368-T04_good_118.800
SRR6049662Rhizomagastrodiae_C368-T01_good_130.920
SRR6049663Rhizomagastrodiae_C368-T01_good_124.630
SRR6049664Rhizomagastrodiae_C368-T10_good_137.540
SRR6049665Rhizomagastrodiae_C368-T10_good_137.540
SRP279888GastroGastrodia elata tuber 14.02
JuvenJuvenile tuber13.66
Mother_GastroMother tuber of Gastrodia elata 14.34
Mother_JuvenMother tuber of Juvenile 6.83