Detail information of GWHGAAEX018762/evm.TU.scaffold_98.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|18977745|ref|NP_579102.1|5.00E-19cation transporter [Pyrococcus furiosus DSM 3638]
KOGKOG14853.00E-167Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily)
nrgi|743839426|ref|XP_010936997.1|0PREDICTED: metal tolerance protein 4-like isoform X1 [Elaeis guineensis]
Swissprottr|Q10PP8|MTP4_ORYSJ0Metal tolerance protein 4
trEMBLtr|M0T645|M0T645_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P11470_001}
TAIRAT3G580603.00E-167Cation efflux family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009418150821873293-
Transcript Sequence

Network for GWHGAAEX018762

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01545.20Cation_efflux1233151.00E-24
PF16916.4ZT_dimer3203951.10E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006812Biological Processcation transport
GO:0055085Biological Processtransmembrane transport
GO:0008324Molecular Functioncation transmembrane transporter activity
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.380
SRR2545915Juvenile tuber21.440
SRP108465SRR5643513five period of Gastrodia elata19.110
SRR5643514five period of Gastrodia elata23.930
SRR5643515five period of Gastrodia elata19.760
SRR5643524five period of Gastrodia elata23.070
SRR5643525five period of Gastrodia elata22.330
SRR5643528five period of Gastrodia elata19.530
SRR5643658five period of Gastrodia elata22.150
SRR5643659five period of Gastrodia elata11.770
SRR5643660five period of Gastrodia elata12.810
SRR5643661five period of Gastrodia elata10.330
SRR5643662five period of Gastrodia elata13.480
SRR5643663five period of Gastrodia elata13.260
SRR5643664five period of Gastrodia elata13.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.790
SRR6049655Rhizomagastrodiae_C368-T10_good_116.320
SRR6049656Rhizomagastrodiae_C368-T07_good_125.980
SRR6049657Rhizomagastrodiae_C368-T07_good_128.480
SRR6049658Rhizomagastrodiae_C368-T04_good_129.900
SRR6049659Rhizomagastrodiae_C368-T04_good_136.370
SRR6049660Rhizomagastrodiae_C368-T01_good_124.490
SRR6049661Rhizomagastrodiae_C368-T04_good_129.390
SRR6049662Rhizomagastrodiae_C368-T01_good_121.700
SRR6049663Rhizomagastrodiae_C368-T01_good_121.640
SRR6049664Rhizomagastrodiae_C368-T10_good_128.910
SRR6049665Rhizomagastrodiae_C368-T10_good_128.910
SRP279888GastroGastrodia elata tuber 11.99
JuvenJuvenile tuber9.94
Mother_GastroMother tuber of Gastrodia elata 12.80
Mother_JuvenMother tuber of Juvenile 13.38