Detail information of GWHGAAEX018763/evm.TU.scaffold_98.33
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|307720288|ref|YP_003891428.1| | 4.00E-14 | ATPase P [Sulfurimonas autotrophica DSM 16294] |
| KOG | KOG0206 | 0 | P-type ATPase |
| nr | gi|672138895|ref|XP_008793217.1| | 0 | PREDICTED: putative phospholipid-transporting ATPase 4 [Phoenix dactylifera] |
| Swissprot | tr|Q9LVK9|ALA7_ARATH | 0 | Putative phospholipid-transporting ATPase 7 |
| trEMBL | tr|U5CQ65|U5CQ65_AMBTC | 0 | Uncharacterized protein {ECO:0000313|EMBL:ERN15321.1} |
| TAIR | AT3G13900 | 0 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000094 | 1938757 | 1945594 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018763
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF16209.4 | PhoLip_ATPase_N | 65 | 120 | 2.60E-21 |
| PF13246.5 | Cation_ATPase | 562 | 653 | 2.90E-12 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0015914 | Biological Process | phospholipid transport |
| GO:0140326 | Molecular Function | ATPase-coupled intramembrane lipid transporter activity |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0000166 | Molecular Function | nucleotide binding |
| GO:0000287 | Molecular Function | magnesium ion binding |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.090 |
| SRR2545915 | Juvenile tuber | 3.170 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.210 |
| SRR5643514 | five period of Gastrodia elata | 3.660 | |
| SRR5643515 | five period of Gastrodia elata | 3.740 | |
| SRR5643524 | five period of Gastrodia elata | 3.600 | |
| SRR5643525 | five period of Gastrodia elata | 3.620 | |
| SRR5643528 | five period of Gastrodia elata | 2.320 | |
| SRR5643658 | five period of Gastrodia elata | 3.180 | |
| SRR5643659 | five period of Gastrodia elata | 5.730 | |
| SRR5643660 | five period of Gastrodia elata | 4.720 | |
| SRR5643661 | five period of Gastrodia elata | 3.810 | |
| SRR5643662 | five period of Gastrodia elata | 6.900 | |
| SRR5643663 | five period of Gastrodia elata | 6.150 | |
| SRR5643664 | five period of Gastrodia elata | 7.810 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 5.490 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.460 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.100 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.770 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 5.720 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 4.850 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 6.450 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.240 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.190 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 8.360 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 5.470 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 5.470 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 8.21 |
| Juven | Juvenile tuber | 2.41 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.45 | |
| Mother_Juven | Mother tuber of Juvenile | 2.41 |