Detail information of GWHGAAEX018764/evm.TU.scaffold_98.34


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|94971484|ref|YP_593532.1|7.00E-27serine/threonine protein kinase [Candidatus Koribacter versatilis Ellin345]
KOGKOG05854.00E-133Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases
nrgi|743839439|ref|XP_010937001.1|1.75E-172PREDICTED: serine/threonine-protein kinase GRIK2-like [Elaeis guineensis]
Swissprottr|Q93V58|GRIK1_ARATH7.00E-134Serine/threonine-protein kinase GRIK1
trEMBLtr|U5CRV6|U5CRV6_AMBTC7.00E-153Uncharacterized protein {ECO:0000313|EMBL:ERN15961.1}
TAIRAT5G605504.00E-133geminivirus rep interacting kinase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009419513041993819-
Transcript Sequence

Network for GWHGAAEX018764

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase973574.10E-57
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CAMKL-LKB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.720
SRR2545915Juvenile tuber20.240
SRP108465SRR5643513five period of Gastrodia elata37.530
SRR5643514five period of Gastrodia elata42.350
SRR5643515five period of Gastrodia elata38.570
SRR5643524five period of Gastrodia elata45.370
SRR5643525five period of Gastrodia elata39.220
SRR5643528five period of Gastrodia elata41.150
SRR5643658five period of Gastrodia elata34.590
SRR5643659five period of Gastrodia elata24.590
SRR5643660five period of Gastrodia elata25.780
SRR5643661five period of Gastrodia elata30.710
SRR5643662five period of Gastrodia elata19.780
SRR5643663five period of Gastrodia elata23.100
SRR5643664five period of Gastrodia elata17.920
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.560
SRR6049655Rhizomagastrodiae_C368-T10_good_124.920
SRR6049656Rhizomagastrodiae_C368-T07_good_123.600
SRR6049657Rhizomagastrodiae_C368-T07_good_122.890
SRR6049658Rhizomagastrodiae_C368-T04_good_118.180
SRR6049659Rhizomagastrodiae_C368-T04_good_123.700
SRR6049660Rhizomagastrodiae_C368-T01_good_121.460
SRR6049661Rhizomagastrodiae_C368-T04_good_117.570
SRR6049662Rhizomagastrodiae_C368-T01_good_124.000
SRR6049663Rhizomagastrodiae_C368-T01_good_122.530
SRR6049664Rhizomagastrodiae_C368-T10_good_128.120
SRR6049665Rhizomagastrodiae_C368-T10_good_128.120
SRP279888GastroGastrodia elata tuber 19.40
JuvenJuvenile tuber35.78
Mother_GastroMother tuber of Gastrodia elata 34.95
Mother_JuvenMother tuber of Juvenile 38.52