Detail information of GWHGAAEX018768/evm.TU.scaffold_98.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG02120Uncharacterized conserved protein
nrgi|743771845|ref|XP_010916213.1|0PREDICTED: protein VAC14 homolog isoform X1 [Elaeis guineensis]
Swissprottr|Q9ZU97|VAC14_ARATH0Protein VAC14 homolog
trEMBLtr|M5Y3P4|M5Y3P4_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ26405.1}
TAIRAT2G016900ARM repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009423768902467066+
Transcript Sequence

Network for GWHGAAEX018768

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12755.6Vac14_Fab1_bd651616.80E-40
PF11916.7Vac14_Fig4_bd4306083.90E-68
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.110
SRR2545915Juvenile tuber36.540
SRP108465SRR5643513five period of Gastrodia elata14.650
SRR5643514five period of Gastrodia elata13.090
SRR5643515five period of Gastrodia elata14.920
SRR5643524five period of Gastrodia elata13.650
SRR5643525five period of Gastrodia elata13.790
SRR5643528five period of Gastrodia elata13.250
SRR5643658five period of Gastrodia elata16.690
SRR5643659five period of Gastrodia elata18.170
SRR5643660five period of Gastrodia elata18.910
SRR5643661five period of Gastrodia elata18.770
SRR5643662five period of Gastrodia elata18.540
SRR5643663five period of Gastrodia elata23.390
SRR5643664five period of Gastrodia elata21.910
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.500
SRR6049655Rhizomagastrodiae_C368-T10_good_121.960
SRR6049656Rhizomagastrodiae_C368-T07_good_121.300
SRR6049657Rhizomagastrodiae_C368-T07_good_127.250
SRR6049658Rhizomagastrodiae_C368-T04_good_126.360
SRR6049659Rhizomagastrodiae_C368-T04_good_129.280
SRR6049660Rhizomagastrodiae_C368-T01_good_123.400
SRR6049661Rhizomagastrodiae_C368-T04_good_123.140
SRR6049662Rhizomagastrodiae_C368-T01_good_118.650
SRR6049663Rhizomagastrodiae_C368-T01_good_121.400
SRR6049664Rhizomagastrodiae_C368-T10_good_118.660
SRR6049665Rhizomagastrodiae_C368-T10_good_118.660
SRP279888GastroGastrodia elata tuber 30.72
JuvenJuvenile tuber21.34
Mother_GastroMother tuber of Gastrodia elata 20.34
Mother_JuvenMother tuber of Juvenile 22.29