Detail information of GWHGAAEX018769/evm.TU.scaffold_98.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743884008|ref|XP_010909567.1|3.40E-70PREDICTED: cell number regulator 2-like [Elaeis guineensis]
Swissprottr|Q9LQU4|PCR2_ARATH9.00E-56Protein PLANT CADMIUM RESISTANCE 2
trEMBLtr|M0TIR2|M0TIR2_MUSAM2.00E-65Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P18750_001}
TAIRAT1G148703.00E-55PLANT CADMIUM RESISTANCE 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009424671562469179-
Transcript Sequence

Network for GWHGAAEX018769

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04749.16PLAC8321301.40E-25
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.690
SRR2545915Juvenile tuber72.040
SRP108465SRR5643513five period of Gastrodia elata76.700
SRR5643514five period of Gastrodia elata48.160
SRR5643515five period of Gastrodia elata65.590
SRR5643524five period of Gastrodia elata61.710
SRR5643525five period of Gastrodia elata2.980
SRR5643528five period of Gastrodia elata2.790
SRR5643658five period of Gastrodia elata1.510
SRR5643659five period of Gastrodia elata18.860
SRR5643660five period of Gastrodia elata23.660
SRR5643661five period of Gastrodia elata21.640
SRR5643662five period of Gastrodia elata16.870
SRR5643663five period of Gastrodia elata9.930
SRR5643664five period of Gastrodia elata14.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_154.910
SRR6049655Rhizomagastrodiae_C368-T10_good_166.280
SRR6049656Rhizomagastrodiae_C368-T07_good_128.760
SRR6049657Rhizomagastrodiae_C368-T07_good_164.210
SRR6049658Rhizomagastrodiae_C368-T04_good_124.300
SRR6049659Rhizomagastrodiae_C368-T04_good_112.750
SRR6049660Rhizomagastrodiae_C368-T01_good_127.920
SRR6049661Rhizomagastrodiae_C368-T04_good_118.040
SRR6049662Rhizomagastrodiae_C368-T01_good_114.900
SRR6049663Rhizomagastrodiae_C368-T01_good_118.080
SRR6049664Rhizomagastrodiae_C368-T10_good_137.010
SRR6049665Rhizomagastrodiae_C368-T10_good_137.010
SRP279888GastroGastrodia elata tuber 31.55
JuvenJuvenile tuber696.39
Mother_GastroMother tuber of Gastrodia elata 183.64
Mother_JuvenMother tuber of Juvenile 442.48