Detail information of GWHGAAEX018771/evm.TU.scaffold_98.42


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG03176.00E-134Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein
nrgi|672110836|ref|XP_008797557.1|0PREDICTED: peroxisome biogenesis factor 10 isoform X2 [Phoenix dactylifera]
Swissprottr|Q9SYU4|PEX10_ARATH2.00E-166Peroxisome biogenesis factor 10
trEMBLtr|M0UBT3|M0UBT3_MUSAM3.00E-180Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP23750_001}
TAIRAT2G263506.00E-134peroxin 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009425275722600794-
Transcript Sequence

Network for GWHGAAEX018771

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04757.13Pex2_Pex12402682.60E-47
PF13639.5zf-RING_23353741.00E-08
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING

KEGG pathway

KO Enzyme pathway mapID
K13346PEX10 Peroxisome map04146

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.440
SRR2545915Juvenile tuber17.230
SRP108465SRR5643513five period of Gastrodia elata16.400
SRR5643514five period of Gastrodia elata14.030
SRR5643515five period of Gastrodia elata15.530
SRR5643524five period of Gastrodia elata13.860
SRR5643525five period of Gastrodia elata12.110
SRR5643528five period of Gastrodia elata8.730
SRR5643658five period of Gastrodia elata11.930
SRR5643659five period of Gastrodia elata20.220
SRR5643660five period of Gastrodia elata21.590
SRR5643661five period of Gastrodia elata18.000
SRR5643662five period of Gastrodia elata18.270
SRR5643663five period of Gastrodia elata16.890
SRR5643664five period of Gastrodia elata18.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.220
SRR6049655Rhizomagastrodiae_C368-T10_good_118.070
SRR6049656Rhizomagastrodiae_C368-T07_good_115.480
SRR6049657Rhizomagastrodiae_C368-T07_good_120.300
SRR6049658Rhizomagastrodiae_C368-T04_good_118.410
SRR6049659Rhizomagastrodiae_C368-T04_good_119.350
SRR6049660Rhizomagastrodiae_C368-T01_good_118.890
SRR6049661Rhizomagastrodiae_C368-T04_good_114.280
SRR6049662Rhizomagastrodiae_C368-T01_good_114.990
SRR6049663Rhizomagastrodiae_C368-T01_good_116.250
SRR6049664Rhizomagastrodiae_C368-T10_good_115.320
SRR6049665Rhizomagastrodiae_C368-T10_good_115.320
SRP279888GastroGastrodia elata tuber 16.46
JuvenJuvenile tuber19.58
Mother_GastroMother tuber of Gastrodia elata 18.27
Mother_JuvenMother tuber of Juvenile 19.49