Detail information of GWHGAAEX018784/evm.TU.scaffold_98.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186684030|ref|YP_001867226.1|3.00E-25pentapeptide repeat-containing protein [Nostoc punctiforme PCC 73102]
KOGKOG16657.00E-135AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats
nrgi|743774948|ref|XP_010917845.1|2.37E-153PREDICTED: FH protein interacting protein FIP2 isoform X2 [Elaeis guineensis]
Swissprottr|Q9SE95|FIP2_ARATH2.00E-135FH protein interacting protein FIP2
trEMBLtr|M0SJA0|M0SJA0_MUSAM7.00E-153Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P30860_001}
TAIRAT5G550007.00E-135potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009433289103390089+
Transcript Sequence

Network for GWHGAAEX018784

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02214.21BTB_2121017.10E-19
PF00805.21Pentapeptide1682000.0005
PF00805.21Pentapeptide2282673.10E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0051260Biological Processprotein homooligomerization
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.900
SRR2545915Juvenile tuber24.670
SRP108465SRR5643513five period of Gastrodia elata29.900
SRR5643514five period of Gastrodia elata35.370
SRR5643515five period of Gastrodia elata29.590
SRR5643524five period of Gastrodia elata35.050
SRR5643525five period of Gastrodia elata32.300
SRR5643528five period of Gastrodia elata31.200
SRR5643658five period of Gastrodia elata25.810
SRR5643659five period of Gastrodia elata21.350
SRR5643660five period of Gastrodia elata21.560
SRR5643661five period of Gastrodia elata20.860
SRR5643662five period of Gastrodia elata24.750
SRR5643663five period of Gastrodia elata26.500
SRR5643664five period of Gastrodia elata25.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.470
SRR6049655Rhizomagastrodiae_C368-T10_good_124.450
SRR6049656Rhizomagastrodiae_C368-T07_good_132.420
SRR6049657Rhizomagastrodiae_C368-T07_good_137.410
SRR6049658Rhizomagastrodiae_C368-T04_good_135.640
SRR6049659Rhizomagastrodiae_C368-T04_good_138.730
SRR6049660Rhizomagastrodiae_C368-T01_good_139.840
SRR6049661Rhizomagastrodiae_C368-T04_good_134.120
SRR6049662Rhizomagastrodiae_C368-T01_good_132.180
SRR6049663Rhizomagastrodiae_C368-T01_good_130.030
SRR6049664Rhizomagastrodiae_C368-T10_good_139.430
SRR6049665Rhizomagastrodiae_C368-T10_good_139.430
SRP279888GastroGastrodia elata tuber 40.59
JuvenJuvenile tuber36.55
Mother_GastroMother tuber of Gastrodia elata 41.15
Mother_JuvenMother tuber of Juvenile 41.68