Detail information of GWHGAAEX018789/evm.TU.scaffold_98.67


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743774321|ref|XP_010917512.1|0PREDICTED: MACPF domain-containing protein At1g14780 [Elaeis guineensis]
Swissprottr|Q8L612|MACP1_ARATH0MACPF domain-containing protein At1g14780
trEMBLtr|M0U0P6|M0U0P6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P15890_001}
TAIRAT1G147800MAC/Perforin domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009435774153589707-
Transcript Sequence

Network for GWHGAAEX018789

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01823.18MACPF1003141.00E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.340
SRR2545915Juvenile tuber8.600
SRP108465SRR5643513five period of Gastrodia elata9.550
SRR5643514five period of Gastrodia elata5.330
SRR5643515five period of Gastrodia elata18.160
SRR5643524five period of Gastrodia elata16.740
SRR5643525five period of Gastrodia elata8.050
SRR5643528five period of Gastrodia elata16.620
SRR5643658five period of Gastrodia elata3.710
SRR5643659five period of Gastrodia elata9.010
SRR5643660five period of Gastrodia elata6.530
SRR5643661five period of Gastrodia elata16.240
SRR5643662five period of Gastrodia elata29.610
SRR5643663five period of Gastrodia elata16.010
SRR5643664five period of Gastrodia elata20.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.860
SRR6049655Rhizomagastrodiae_C368-T10_good_12.820
SRR6049656Rhizomagastrodiae_C368-T07_good_13.940
SRR6049657Rhizomagastrodiae_C368-T07_good_12.830
SRR6049658Rhizomagastrodiae_C368-T04_good_11.200
SRR6049659Rhizomagastrodiae_C368-T04_good_11.270
SRR6049660Rhizomagastrodiae_C368-T01_good_16.320
SRR6049661Rhizomagastrodiae_C368-T04_good_12.360
SRR6049662Rhizomagastrodiae_C368-T01_good_15.480
SRR6049663Rhizomagastrodiae_C368-T01_good_15.990
SRR6049664Rhizomagastrodiae_C368-T10_good_13.090
SRR6049665Rhizomagastrodiae_C368-T10_good_13.090
SRP279888GastroGastrodia elata tuber 12.11
JuvenJuvenile tuber2.01
Mother_GastroMother tuber of Gastrodia elata 292.23
Mother_JuvenMother tuber of Juvenile 165.08